RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 EHHADHQ08426 723 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 NEDD1Q8NHV4 660 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 ANKS1AQ92625 1134 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 MS4A14Q96JA4 679 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 CEP63Q96MT8 703 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 TMEM39BQ9GZU3 492 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 TARSL2A2RTX5 802 aaKnown RBP8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 UPP2O95045 317 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 CTSHP09668 335 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 STAT3P40763 770 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 NUMBP49757 651 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 TMEM62Q0P6H9 643 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 CENPPQ6IPU0 288 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 LRRC31Q6UY01 552 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 FMNL3Q8IVF7 1028 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 SLFN12Q8IYM2 578 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 BLOC1S4Q9NUP1 217 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 FAM184BQ9ULE4 1060 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 ODF2LQ9ULJ1 636 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 PCDHB4Q9Y5E5 795 aa8.95□□□□□ -0.98
PTPDC1-204ENST00000620992 ABCB11O95342 1321 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 FTCDO95954 541 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TCP1P17987 556 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 KRT15P19012 456 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 EXOC3L4Q17RC7 722 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 CFAP157Q5JU67 520 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TWF2Q6IBS0 349 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TMEM179Q6ZVK1 233 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TBC1D16Q8TBP0 767 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 VIPAS39Q9H9C1 493 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 STK17AQ9UEE5 414 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 SWAP70Q9UH65 585 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 ESYT3A0FGR9 886 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 APBA1Q02410 837 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 MTMR2Q13614 643 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 PPP2R5AQ15172 486 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 FAM160B1Q5W0V3 765 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 KCNK18Q7Z418 384 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 CREG2Q8IUH2 290 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 GLYCTKQ8IVS8 523 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 PNMA5Q96PV4 448 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 RTFDC1Q9BY42 306 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 GOLGA8CPA6NN73 597 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 HUNKP57058 714 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 FOXD4Q12950 439 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 KRT81Q14533 505 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 CDO1Q16878 200 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 KCTD16Q68DU8 428 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 GBP6Q6ZN66 633 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 C16orf86Q6ZW13 317 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 MYLK4Q86YV6 388 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 GUF1Q8N442 669 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 CCDC89Q8N998 374 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 CCNYQ8ND76 341 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 RAD54LQ92698 747 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 VPS37BQ9H9H4 285 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 GPBP1L1Q9HC44 474 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 PACSIN2Q9UNF0 486 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 PTPN22Q9Y2R2 807 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 A0A1B0GUL6 1792 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 A0A1W2PQJ5 194 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TNPO2O14787 897 aaKnown RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 ZBTB24O43167 697 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 ZNF157P51786 506 aaPredicted RBP8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TRIM50Q86XT4 487 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 UBL4BQ8N7F7 174 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 GSDMBQ8TAX9 411 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 TBC1D31Q96DN5 1066 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 SIK3Q9Y2K2 1263 aa8.94□□□□□ -0.98
PTPDC1-204ENST00000620992 E9PMD0 336 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 TLR3O15455 904 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 CRCPO75575 148 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 GAS8O95995 478 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 PDHBP11177 359 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 KCNA4P22459 653 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 TM4SF1P30408 202 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 PPP4CP60510 307 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 FKBP3Q00688 224 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 LRRC63Q05C16 580 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 SNX1Q13596 522 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 TAF1CQ15572 869 aaPredicted RBP8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 FAM186BQ8IYM0 893 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 MCUQ8NE86 351 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 MAD1L1Q9Y6D9 718 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 KDM3AQ9Y4C1 1321 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 PVALEFA0A1B0GWK0 134 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 GFPT2O94808 682 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 QRICH1Q2TAL8 776 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 CFAP221Q4G0U5 840 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 FIGNQ5HY92 759 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 SWSAP1Q6NVH7 229 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 AMIGO3Q86WK7 504 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 SCN4BQ8IWT1 228 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 ANKRD42Q8N9B4 389 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 RBM12Q9NTZ6 932 aaKnown RBP8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 ADAMTS1Q9UHI8 967 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 ZNF148Q9UQR1 794 aa8.93□□□□□ -0.98
PTPDC1-204ENST00000620992 BZW2Q9Y6E2 419 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms