RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 PHOSPHO2Q8TCD6 241 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 PRPF31Q8WWY3 499 aaKnown RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 NLRP7Q8WX94 980 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 PSPC1Q8WXF1 523 aaKnown RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 ZNF668Q96K58 619 aaPredicted RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 SCLT1Q96NL6 688 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 SLC9A7Q96T83 725 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 NT5C3AQ9H0P0 336 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 TFIP11Q9UBB9 837 aaKnown RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 DNM3Q9UQ16 869 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 ZDHHC9Q9Y397 364 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 NOC2LQ9Y3T9 749 aaKnown RBP20.35■□□□□ 0.85
LITAF-220ENST00000620789 COL4A3BPQ9Y5P4 624 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 MICAL3Q7RTP6 2002 aa20.35■□□□□ 0.85
LITAF-220ENST00000620789 E9PMD0 336 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 SLC26A4O43511 780 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 EIF4BP23588 611 aaKnown RBP20.34■□□□□ 0.85
LITAF-220ENST00000620789 UBA7P41226 1012 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 STK38Q15208 465 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 ZRSR1Q15695 479 aaKnown RBP20.34■□□□□ 0.85
LITAF-220ENST00000620789 FOXD4L6Q3SYB3 417 aaPredicted RBP20.34■□□□□ 0.85
LITAF-220ENST00000620789 ODR4Q5SWX8 454 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 FOXD4L3Q6VB84 417 aaPredicted RBP20.34■□□□□ 0.85
LITAF-220ENST00000620789 ZNF410Q86VK4 478 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 LINC00301Q8NCQ3 95 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 LRCH3Q96II8 777 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 CDK5RAP3Q96JB5 506 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 PNMA5Q96PV4 448 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 CSRNP2Q9H175 543 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 BHMT2Q9H2M3 363 aa20.34■□□□□ 0.85
LITAF-220ENST00000620789 DAXXQ9UER7 740 aaPredicted RBP20.34■□□□□ 0.85
LITAF-220ENST00000620789 A0A087WZ62 844 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 GRXCR1A8MXD5 290 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 YEATS4O95619 227 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 EYA4O95677 639 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 DARSP14868 501 aaKnown RBP20.33■□□□□ 0.85
LITAF-220ENST00000620789 DEFB103AP81534 67 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 GRB10Q13322 594 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 ATL3Q6DD88 541 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 PADI6Q6TGC4 694 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.33■□□□□ 0.85
LITAF-220ENST00000620789 KCNK18Q7Z418 384 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 FAM228AQ86W67 206 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 KSR1Q8IVT5 923 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 MCPH1Q8NEM0 835 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 NLRP4Q96MN2 994 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 FDXACB1Q9BRP7 624 aaPredicted RBP20.33■□□□□ 0.85
LITAF-220ENST00000620789 FTHL17Q9BXU8 183 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 GCOM2Q9BZD3 368 aaPredicted RBP20.33■□□□□ 0.85
LITAF-220ENST00000620789 ERVK-5Q9HDB9 667 aa20.33■□□□□ 0.85
LITAF-220ENST00000620789 PTPRSQ13332 1948 aa20.33■□□□□ 0.84
LITAF-220ENST00000620789 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.32■□□□□ 0.84
LITAF-220ENST00000620789 GPR182O15218 404 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 SPTLC2O15270 562 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 ASAP2O43150 1006 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 AMHP03971 560 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 LAMTOR4Q0VGL1 99 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 NFX1Q12986 1120 aaKnown RBP20.32■□□□□ 0.84
LITAF-220ENST00000620789 MXD4Q14582 209 aaPredicted RBP20.32■□□□□ 0.84
LITAF-220ENST00000620789 TMEM119Q4V9L6 283 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 FAM43BQ6ZT52 329 aaPredicted RBP20.32■□□□□ 0.84
LITAF-220ENST00000620789 KRI1Q8N9T8 703 aaKnown RBP20.32■□□□□ 0.84
LITAF-220ENST00000620789 CALML4Q96GE6 196 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 CLIC6Q96NY7 704 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 ST3GAL5Q9UNP4 418 aa20.32■□□□□ 0.84
LITAF-220ENST00000620789 PPP6R2O75170 966 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 CYP11B2P19099 503 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 ARL2P36404 184 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 DNM1Q05193 864 aaKnown RBP20.31■□□□□ 0.84
LITAF-220ENST00000620789 HERC6Q8IVU3 1022 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 PLIN2Q99541 437 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 CCSER1Q9C0I3 900 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 POLR3FQ9H1D9 316 aaPredicted RBP20.31■□□□□ 0.84
LITAF-220ENST00000620789 TMX1Q9H3N1 280 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 CFAP45Q9UL16 551 aa20.31■□□□□ 0.84
LITAF-220ENST00000620789 SZT2Q5T011 3432 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 SRGAP2CP0DJJ0 459 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 KARSQ15046 597 aaKnown RBP20.3■□□□□ 0.84
LITAF-220ENST00000620789 SPECC1Q5M775 1068 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 GPR153Q6NV75 609 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 MAEAQ7L5Y9 396 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 MYOCDQ8IZQ8 938 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 RNF149Q8NC42 400 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 ASAP3Q8TDY4 903 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 LINC01599Q8WXQ3 324 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 SYMPKQ92797 1274 aaKnown RBP20.3■□□□□ 0.84
LITAF-220ENST00000620789 EPSTI1Q96J88 318 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 PBX4Q9BYU1 374 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 INO80BQ9C086 356 aaPredicted RBP20.3■□□□□ 0.84
LITAF-220ENST00000620789 IFT122Q9HBG6 1241 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 GPRC5CQ9NQ84 441 aa20.3■□□□□ 0.84
LITAF-220ENST00000620789 GBF1Q92538 1859 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 ENPP3O14638 875 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 CSDE1O75534 798 aaKnown RBP20.29■□□□□ 0.84
LITAF-220ENST00000620789 GLRA2P23416 452 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 DNAJB2P25686 324 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 DDIT3P35638 169 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 PBX2P40425 430 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 RABGGTBP53611 331 aa20.29■□□□□ 0.84
LITAF-220ENST00000620789 TFDP1Q14186 410 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms