RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 ZMYM2Q9UBW7 1377 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 GAP43P17677 238 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 RPL13P26373 211 aaKnown RBP21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 HOXA7P31268 230 aaPredicted RBP21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 DNA2P51530 1060 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 BRD3Q15059 726 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 EXOC3L4Q17RC7 722 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 DCAF15Q66K64 600 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 PCIF1Q9H4Z3 704 aa21.14■□□□□ 0.98
LAPTM4B-204ENST00000619747 CTAGE15A4D2H0 777 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 IRF6O14896 467 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 CTAGE8P0CG41 777 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 HIRAP54198 1017 aaPredicted RBP21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 NPEPPSP55786 919 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 SLC9C1Q4G0N8 1177 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 PCNX4Q63HM2 1172 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 FRMD5Q7Z6J6 570 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 CTAGE6Q86UF2 777 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 CTAGE4Q8IX94 777 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 SLC35C1Q96A29 364 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 CCDC43Q96MW1 224 aaKnown RBP21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 JPH2Q9BR39 696 aaPredicted RBP21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 PDCD2LQ9BRP1 358 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 FAM204AQ9H8W3 233 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 TCEAL9Q9UHQ7 104 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 TELO2Q9Y4R8 837 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 UBIAD1Q9Y5Z9 338 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 SAR1BQ9Y6B6 198 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 RPTORQ8N122 1335 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 CXCR5P32302 372 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 PLA2G4FQ68DD2 849 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 ZC3H3Q8IXZ2 948 aaKnown RBP21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 IQCDQ96DY2 449 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 SPAG5Q96R06 1193 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 MMS19Q96T76 1030 aa21.14■□□□□ 0.97
LAPTM4B-204ENST00000619747 FRMPD4Q14CM0 1322 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 EIF3JO75822 258 aaKnown RBP21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 P4HBP07237 508 aaKnown RBP21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 TRIM49P0CI25 452 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 TRIM49CP0CI26 452 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 KLHL30Q0D2K2 578 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 PON1P27169 355 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 USP14P54578 494 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 FAM186BQ8IYM0 893 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 PNKPQ96T60 521 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 PXMP2Q9NR77 195 aa21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 AJAP1Q9UKB5 411 aaPredicted RBP21.13■□□□□ 0.97
LAPTM4B-204ENST00000619747 A0A087X0T9 212 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 K7ENM7 598 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 FAM228BP0C875 321 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 UCHL3P15374 230 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 MAPK7Q13164 816 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 BMT2Q1RMZ1 405 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 HSP90B2PQ58FF3 399 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 TRAPPC11Q7Z392 1133 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 SGIP1Q9BQI5 828 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 GANQ9H2C0 597 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 ANKZF1Q9H8Y5 726 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 QARSP47897 775 aaKnown RBP21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 FAM43BQ6ZT52 329 aaPredicted RBP21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 HS2ST1Q7LGA3 356 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 ABCB6Q9NP58 842 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.12■□□□□ 0.971e-15■■■■■ 139.7
LAPTM4B-204ENST00000619747 GCNT4Q9P109 453 aa21.12■□□□□ 0.97
LAPTM4B-204ENST00000619747 NCK2O43639 380 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 CCNE2O96020 404 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 ASTE1Q2TB18 679 aaPredicted RBP21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 PACSIN1Q9BY11 444 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 GBP3Q9H0R5 595 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 PPP1R12AO14974 1030 aaPredicted RBP21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 BCRP11274 1271 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 YWHABP31946 246 aaKnown RBP21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 RARRES1P49788 294 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 SOX10P56693 466 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 CNKSR2Q8WXI2 1034 aa21.11■□□□□ 0.97
LAPTM4B-204ENST00000619747 SERPING1P05155 500 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 TMEM132BQ14DG7 1078 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 WHAMMP3Q1A5X7 153 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 ZSWIM2Q8NEG5 633 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 AGPAT3Q9NRZ7 376 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 L1RE1Q9UN81 338 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 MYH11P35749 1972 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 PSMC2P35998 433 aaKnown RBP21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 MAP9Q49MG5 647 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 KLHDC7AQ5VTJ3 777 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 EHBP1Q8NDI1 1231 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 CAGE1Q8TC20 777 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 SMARCAL1Q9NZC9 954 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 GPRC5DQ9NZD1 345 aa21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 POLR2AP24928 1970 aaKnown RBP21.1■□□□□ 0.97
LAPTM4B-204ENST00000619747 BACH1O14867 736 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 EXOC3O60645 756 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 NR3C2P08235 984 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 ZNF131P52739 623 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 PTK2Q05397 1052 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 ASIC2Q16515 512 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 PTPROQ16827 1216 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 GBP6Q6ZN66 633 aa21.09■□□□□ 0.97
LAPTM4B-204ENST00000619747 RBM46Q8TBY0 533 aaKnown RBP21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms