RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 PPWD1Q96BP3 646 aaKnown RBP21.66■■□□□ 1.06
FGFR1-241ENST00000619564 KLHL8Q9P2G9 620 aaPredicted RBP21.66■■□□□ 1.06
FGFR1-241ENST00000619564 PAPOLAP51003 745 aaKnown RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 CNOT10Q9H9A5 744 aaKnown RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 ASB14A6NK59 587 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 TBXAS1P24557 533 aaPredicted RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 TAF1BQ53T94 588 aaPredicted RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 ADGRF4Q8IZF3 695 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 CDC26Q8NHZ8 85 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 ISCA1Q9BUE6 129 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 UBE4BO95155 1302 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 PLS3P13797 630 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 STMN1P16949 149 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 COASYQ13057 564 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 TTC13Q8NBP0 860 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 ALKBH8Q96BT7 664 aaKnown RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 MRPL4Q9BYD3 311 aaKnown RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 PREX2Q70Z35 1606 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 MFAP3LO75121 409 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 ALX1Q15699 326 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 KIAA1755Q5JYT7 1200 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 DACT3Q96B18 629 aaPredicted RBP21.65■■□□□ 1.06
FGFR1-241ENST00000619564 TMEM260Q9NX78 707 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 SEL1LQ9UBV2 794 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 RFX7Q2KHR2 1363 aa21.65■■□□□ 1.06
FGFR1-241ENST00000619564 ZCCHC11Q5TAX3 1644 aaKnown RBP21.64■■□□□ 1.06
FGFR1-241ENST00000619564 TOB2Q14106 344 aaPredicted RBP21.64■■□□□ 1.06
FGFR1-241ENST00000619564 SLFNL1Q499Z3 407 aa21.64■■□□□ 1.06
FGFR1-241ENST00000619564 POLR3FQ9H1D9 316 aaPredicted RBP21.64■■□□□ 1.06
FGFR1-241ENST00000619564 SMIM24O75264 130 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 TAC1P20366 129 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 SLC8A1P32418 973 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 EFHD1Q9BUP0 239 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 LY9Q9HBG7 655 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 BARHL2Q9NY43 387 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 MOSPD1Q9UJG1 213 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 POTEB3A0JP26 581 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 MIF4GDA9UHW6 222 aaKnown RBP21.64■■□□□ 1.05
FGFR1-241ENST00000619564 POTECB2RU33 542 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 POTEBQ6S5H4 581 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 CALR3Q96L12 384 aaKnown RBP21.64■■□□□ 1.05
FGFR1-241ENST00000619564 GAS2L3Q86XJ1 694 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 TTC39CQ8N584 583 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 ZMYND12Q9H0C1 365 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 SUGT1Q9Y2Z0 365 aa21.64■■□□□ 1.05
FGFR1-241ENST00000619564 FGGP02679 453 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 NNMTP40261 264 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 EIF3BP55884 814 aaKnown RBP21.63■■□□□ 1.05
FGFR1-241ENST00000619564 FSD1LQ9BXM9 530 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 STAP1Q9ULZ2 295 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 NFIXQ14938 502 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 IFT43Q96FT9 208 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 MMTAG2Q9BU76 263 aaKnown RBP21.63■■□□□ 1.05
FGFR1-241ENST00000619564 CTNND1O60716 968 aaKnown RBP21.63■■□□□ 1.05
FGFR1-241ENST00000619564 YWHAHQ04917 246 aaPredicted RBP21.63■■□□□ 1.05
FGFR1-241ENST00000619564 KNOP1Q1ED39 458 aaKnown RBP21.63■■□□□ 1.05
FGFR1-241ENST00000619564 TTC30AQ86WT1 665 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 PASD1Q8IV76 773 aa21.63■■□□□ 1.05
FGFR1-241ENST00000619564 GPC5P78333 572 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 LARP7Q4G0J3 582 aaKnown RBP eCLIP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 SLC13A4Q9UKG4 626 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 CRB1P82279 1406 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 CCDC188H7C350 402 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 ZRANB2O95218 330 aaKnown RBP eCLIP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 CUL1Q13616 776 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 RPAP3Q9H6T3 665 aaPredicted RBP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 M0QYV0 167 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 CCT5P48643 541 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 CDR2Q01850 454 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 ATG16L1Q676U5 607 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 MB21D2Q8IYB1 491 aaPredicted RBP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 PODXLO00592 558 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 SDC4P31431 198 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 VAMP7P51809 220 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 RSBN1LQ6PCB5 846 aaPredicted RBP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 EXT2Q93063 718 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 ACAP3Q96P50 834 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 LXNQ9BS40 222 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 TUBB6Q9BUF5 446 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 SYNGAP1Q96PV0 1343 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 SEC31AO94979 1220 aaKnown RBP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 TARBP1Q13395 1621 aaKnown RBP21.62■■□□□ 1.05
FGFR1-241ENST00000619564 KRT39Q6A163 491 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 AFG1LQ8WV93 481 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 GJB4Q9NTQ9 266 aa21.62■■□□□ 1.05
FGFR1-241ENST00000619564 KRT37O76014 449 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 EN1Q05925 392 aaPredicted RBP21.61■■□□□ 1.05
FGFR1-241ENST00000619564 KCNV1Q6PIU1 500 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 LGALS16A8MUM7 142 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 ARL4CP56559 192 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 FRA10AC1Q70Z53 315 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 PIDD1Q9HB75 910 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 PLA2R1Q13018 1463 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 NEMP1O14524 444 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 ATP1A3P13637 1013 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 OXER1Q8TDS5 423 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 FAM84BQ96KN1 310 aaPredicted RBP21.61■■□□□ 1.05
FGFR1-241ENST00000619564 INPP1P49441 399 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 LIG3P49916 1009 aa21.61■■□□□ 1.05
FGFR1-241ENST00000619564 SH3BGRP55822 239 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms