RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 DNAJC9Q8WXX5 260 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 SLF1Q9BQI6 1058 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PLCL2Q9UPR0 1127 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 SGSM1Q2NKQ1 1148 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 LONRF3Q496Y0 759 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 RNF34Q969K3 372 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 THOC1Q96FV9 657 aaKnown RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 RAB20Q9NX57 234 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 STX8Q9UNK0 236 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 MRPL12P52815 198 aaKnown RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 MCCD1P59942 119 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 RINT1Q6NUQ1 792 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 FOXP1Q9H334 677 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 NAPAP54920 295 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 TMED2Q15363 201 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 ABHD8Q96I13 439 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 ACADSP16219 412 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 HSPA13P48723 471 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 OTUB1Q96FW1 271 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PSMB7Q99436 277 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 IARS2Q9NSE4 1012 aaKnown RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PTPRUQ92729 1446 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 NCOA3Q9Y6Q9 1424 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 A0A1B0GVL5 298 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 RGS5O15539 181 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 OCRLQ01968 901 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 VTI1AQ96AJ9 217 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 PPRC1Q5VV67 1664 aaKnown RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 MT-ND3P03897 115 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 KRT1P04264 644 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 HABP4Q5JVS0 413 aaKnown RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 GET4Q7L5D6 327 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 RNF217Q8TC41 542 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 CCDC134Q9H6E4 229 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 CBFA2T3O75081 653 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 TNFRSF21O75509 655 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 DDAH1O94760 285 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 APOA4P06727 396 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 MTTPP55157 894 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 KLHL17Q6TDP4 642 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 EPM2AIP1Q7L775 607 aaPredicted RBP9.88□□□□□ -0.83
COL12A1-211ENST00000615798 STK32CQ86UX6 486 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 KIFC1Q9BW19 673 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 EDEM3Q9BZQ6 932 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 CCDC87Q9NVE4 849 aa9.88□□□□□ -0.83
COL12A1-211ENST00000615798 CITO14578 2027 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 TXNDC11Q6PKC3 985 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 DCLK2Q8N568 766 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 MRPL39Q9NYK5 338 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 LIMA1Q9UHB6 759 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 PLEKHG2Q9H7P9 1386 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 BCRP11274 1271 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 DZIP3Q86Y13 1208 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 VPS37AQ8NEZ2 397 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 CYGBQ8WWM9 190 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 XAGE2Q96GT9 111 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 TRAP1Q12931 704 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 PRPSAP1Q14558 356 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 CC2D1AQ6P1N0 951 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 DIS3L2Q8IYB7 885 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 CDC23Q9UJX2 597 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 ITM2BQ9Y287 266 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 KDM3AQ9Y4C1 1321 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 EFTUD2Q15029 972 aaKnown RBP eCLIP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 CCDC36Q8IYA8 594 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 BTBD7Q9P203 1132 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 AGLP35573 1532 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 EPS8Q12929 822 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 AKIRIN2Q53H80 203 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 AK8Q96MA6 479 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 TSGA10IPQ3SY00 556 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 SNRKQ9NRH2 765 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 DLGAP2Q9P1A6 1054 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 SEL1LQ9UBV2 794 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 RABGEF1Q9UJ41 708 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 APOBEC2Q9Y235 224 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 USTQ9Y2C2 406 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 POC1B-GALNT4F8VUJ3 575 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 SRGAP2BP0DMP2 458 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 MYBPC2Q14324 1141 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 SLC39A14Q15043 492 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 AP1S3Q96PC3 154 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 MOV10L1Q9BXT6 1211 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 BSDC1Q9NW68 430 aaPredicted RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 RCOR1Q9UKL0 485 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 SPDYE3A6NKU9 549 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 H7C1D1 291 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 HDLBPQ00341 1268 aaKnown RBP9.87□□□□□ -0.83
COL12A1-211ENST00000615798 KIF19Q2TAC6 998 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 SKA1Q96BD8 255 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 RPS6KC1Q96S38 1066 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 PITPNM3Q9BZ71 974 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 NFE2L3Q9Y4A8 694 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 DNM2P50570 870 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 MORF4L2Q15014 288 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 C2CD6Q53TS8 623 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 TTC25Q96NG3 672 aa9.87□□□□□ -0.83
COL12A1-211ENST00000615798 USP42Q9H9J4 1324 aaKnown RBP9.86□□□□□ -0.83
COL12A1-211ENST00000615798 SLC12A1Q13621 1099 aa9.86□□□□□ -0.83
COL12A1-211ENST00000615798 POLNQ7Z5Q5 900 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms