RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 RASSF9O75901 435 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 HOXB4P17483 251 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SCNN1AP37088 669 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ASMTP46597 345 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PLTPP55058 493 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 BPIFB4P59827 614 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GNAI1P63096 354 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TRAP1Q12931 704 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 E2F2Q14209 437 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NAA30Q147X3 362 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 INSCQ1MX18 579 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MYLK3Q32MK0 819 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ZSCAN23Q3MJ62 389 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TRAPPC3LQ5T215 181 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 C20orf194Q5TEA3 1177 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TBC1D9BQ66K14 1250 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 C1orf228Q6PIY5 440 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 DSTYKQ6XUX3 929 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 BZW1Q7L1Q6 419 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CCDC148Q8NFR7 591 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 OR52K2Q8NGK3 314 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 OTUD7AQ8TE49 926 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SCG3Q8WXD2 468 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PEX13Q92968 403 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FAM20AQ96MK3 541 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 COG8Q96MW5 612 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TBC1D32Q96NH3 1257 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SMC6Q96SB8 1091 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 DNAJC7Q99615 494 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FAM129AQ9BZQ8 928 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GLT8D2Q9H1C3 349 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 C12orf10Q9HB07 376 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ALG13Q9NP73 1137 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 RAB6BQ9NRW1 208 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ANKEF1Q9NU02 776 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CABP1Q9NZU7 370 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CXXC1Q9P0U4 656 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ZNF112Q9UJU3 913 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 R3HDM2Q9Y2K5 976 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ANGPTL3Q9Y5C1 460 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SLC4A4Q9Y6R1 1079 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MAPKBP1O60336 1514 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ARPC4-TTLL3A0A0A6YYG9 625 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TRIM43BA6NCK2 446 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 RTCAO00442 366 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 BIN1O00499 593 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CDK2AP1O14519 115 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GNAT1P11488 350 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PRKAR1BP31321 381 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 RPL9P32969 192 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 KRT20P35900 424 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MLH1P40692 756 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 RUNX1T1Q06455 604 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 APOBRQ0VD83 1088 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NMIQ13287 307 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SQSTM1Q13501 440 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SEMA3AQ14563 771 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PPP2R5DQ14738 602 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SARM1Q6SZW1 724 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 KDELC1Q6UW63 502 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 LRSAM1Q6UWE0 723 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ANGPTL8Q6UXH0 198 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NLRP9Q7RTR0 991 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 THNSL2Q86YJ6 484 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SPATA5Q8NB90 893 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SMC1BQ8NDV3 1235 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 C7orf57Q8NEG2 295 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GTF3C2Q8WUA4 911 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CHFRQ96EP1 664 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ABHD17AQ96GS6 310 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TMX3Q96JJ7 454 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 DMRTB1Q96MA1 342 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 C16orf45Q96MC5 204 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MTMR9Q96QG7 549 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NTPCRQ9BSD7 190 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CFHR5Q9BXR6 569 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 RHOBTB2Q9BYZ6 727 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 RUBCNLQ9H714 662 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ELAC1Q9H777 363 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 XAB2Q9HCS7 855 aaKnown RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ABCF3Q9NUQ8 709 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MRGBPQ9NV56 204 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MTRRQ9UBK8 725 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ATPIF1Q9UII2 106 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MSRB2Q9Y3D2 182 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 MTF2Q9Y483 593 aaPredicted RBP3.3□□□□□ -1.88
CBWD3-209ENST00000614377 GPSM3Q9Y4H4 160 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SPEF1Q9Y4P9 236 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PCDHB4Q9Y5E5 795 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PLEKHH1Q9ULM0 1364 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 ERCC6Q03468 1493 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FAM221AA4D161 298 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CCDC169A6NNP5 214 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 PIK3R2O00459 728 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 YKT6O15498 198 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 TSC22D2O75157 780 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 FGF18O76093 207 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 NPTXRO95502 500 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 SLC4A1P02730 911 aa3.3□□□□□ -1.88
CBWD3-209ENST00000614377 CTRB1P17538 263 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms