RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 CYP3A4P08684 503 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 SRGAP2BP0DMP2 458 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 FAM43BQ6ZT52 329 aaPredicted RBP26.58■■□□□ 1.85
MMP28-203ENST00000612672 TMC7Q7Z402 723 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 ZBTB33Q86T24 672 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 TMEM105Q8N8V8 129 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 ZNF577Q9BSK1 485 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 RNF216Q9NWF9 866 aaPredicted RBP26.58■■□□□ 1.85
MMP28-203ENST00000612672 GABBR1Q9UBS5 961 aa26.58■■□□□ 1.85
MMP28-203ENST00000612672 FAM186AA6NE01 2351 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 NT5C1B-RDH14C9J2C7 533 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 ZBTB43O43298 467 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 ZNF862O60290 1169 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 CLASP2O75122 1294 aaKnown RBP26.57■■□□□ 1.84
MMP28-203ENST00000612672 HOXB8P17481 243 aaPredicted RBP26.57■■□□□ 1.84
MMP28-203ENST00000612672 ZNF746Q6NUN9 644 aaPredicted RBP26.57■■□□□ 1.84
MMP28-203ENST00000612672 ZNF598Q86UK7 904 aaKnown RBP26.57■■□□□ 1.84
MMP28-203ENST00000612672 TMEM173Q86WV6 379 aaPredicted RBP26.57■■□□□ 1.84
MMP28-203ENST00000612672 TEX2Q8IWB9 1127 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 RNF169Q8NCN4 708 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 HELQQ8TDG4 1101 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 ANO2Q9NQ90 1003 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 SPG21Q9NZD8 308 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 PUF60Q9UHX1 559 aaKnown RBP26.57■■□□□ 1.84
MMP28-203ENST00000612672 AKT3Q9Y243 479 aa26.57■■□□□ 1.84
MMP28-203ENST00000612672 hCG_1984214I3L0E3 225 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 EDIL3O43854 480 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 ASGR2P07307 311 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 IRX6P78412 446 aaPredicted RBP26.56■■□□□ 1.84
MMP28-203ENST00000612672 UGCGQ16739 394 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 ADCK5Q3MIX3 580 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 EFCAB12Q6NXP0 572 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 ASCL5Q7RTU5 278 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 C12orf76Q8N812 135 aaPredicted RBP26.56■■□□□ 1.84
MMP28-203ENST00000612672 ZNF713Q8N859 430 aaPredicted RBP26.56■■□□□ 1.84
MMP28-203ENST00000612672 MRPL43Q8N983 215 aaKnown RBP26.56■■□□□ 1.84
MMP28-203ENST00000612672 CASP10Q92851 521 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 LENG9Q96B70 501 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 C2orf16Q68DN1 1984 aa26.56■■□□□ 1.84
MMP28-203ENST00000612672 GOLGA8AA7E2F4 631 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 GOLGA8BA8MQT2 603 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 GALR2O43603 387 aaPredicted RBP26.55■■□□□ 1.84
MMP28-203ENST00000612672 PPM1AP35813 382 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 SYNE3Q6ZMZ3 975 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 RASEFQ8IZ41 740 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 AUTS2Q8WXX7 1259 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 ADAM7Q9H2U9 754 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 SORCS3Q9UPU3 1222 aa26.55■■□□□ 1.84
MMP28-203ENST00000612672 HOXA2O43364 376 aa26.54■■□□□ 1.84
MMP28-203ENST00000612672 CSDE1O75534 798 aaKnown RBP26.54■■□□□ 1.84
MMP28-203ENST00000612672 EIF4BP23588 611 aaKnown RBP26.54■■□□□ 1.84
MMP28-203ENST00000612672 METAP2P50579 478 aaKnown RBP eCLIP26.54■■□□□ 1.84
MMP28-203ENST00000612672 GPC3P51654 580 aa26.54■■□□□ 1.84
MMP28-203ENST00000612672 DRP2Q13474 957 aa26.54■■□□□ 1.84
MMP28-203ENST00000612672 SMC1AQ14683 1233 aaKnown RBP26.54■■□□□ 1.84
MMP28-203ENST00000612672 NR2E1Q9Y466 385 aa26.54■■□□□ 1.84
MMP28-203ENST00000612672 PCDHA10Q9Y5I2 948 aa26.54■■□□□ 1.84
MMP28-203ENST00000612672 GVINP1Q7Z2Y8 2422 aa26.54■■□□□ 1.84
MMP28-203ENST00000612672 DMXL1Q9Y485 3027 aa26.53■■□□□ 1.84
MMP28-203ENST00000612672 KLF18A0A0U1RQI7 1052 aa26.53■■□□□ 1.84
MMP28-203ENST00000612672 ADD1P35611 737 aaKnown RBP26.53■■□□□ 1.84
MMP28-203ENST00000612672 MTMR3Q13615 1198 aa26.53■■□□□ 1.84
MMP28-203ENST00000612672 PFKFB3Q16875 520 aaPredicted RBP26.53■■□□□ 1.84
MMP28-203ENST00000612672 RARS2Q5T160 578 aaKnown RBP26.53■■□□□ 1.84
MMP28-203ENST00000612672 SMAP1Q8IYB5 467 aaPredicted RBP26.53■■□□□ 1.84
MMP28-203ENST00000612672 ABI1Q8IZP0 508 aa26.53■■□□□ 1.84
MMP28-203ENST00000612672 BCL7CQ8WUZ0 217 aaPredicted RBP26.53■■□□□ 1.84
MMP28-203ENST00000612672 TBC1D22BQ9NU19 505 aa26.53■■□□□ 1.84
MMP28-203ENST00000612672 PROB1E7EW31 1015 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 PSAPP07602 524 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 DARSP14868 501 aaKnown RBP26.52■■□□□ 1.84
MMP28-203ENST00000612672 EPCAMP16422 314 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 KRT17Q04695 432 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 DNAH14Q0VDD8 3507 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 PRR16Q569H4 304 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 SKAP1Q86WV1 359 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 ZBP1Q9H171 429 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 ZNF292O60281 2723 aa26.52■■□□□ 1.84
MMP28-203ENST00000612672 FRYLO94915 3013 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 A0A0U1RQF3 1178 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 MAGEB2O15479 319 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 OATP04181 439 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 ZSCAN20P17040 1043 aaPredicted RBP26.51■■□□□ 1.83
MMP28-203ENST00000612672 BCAR1P56945 870 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 SETQ01105 290 aaPredicted RBP26.51■■□□□ 1.83
MMP28-203ENST00000612672 PRKCEQ02156 737 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 TPRNQ4KMQ1 711 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 GJA10Q969M2 543 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 MAP7D2Q96T17 732 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 ZMYND12Q9H0C1 365 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 GLT8D2Q9H1C3 349 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 CEP131Q9UPN4 1083 aa26.51■■□□□ 1.83
MMP28-203ENST00000612672 MEIS3P2A8K0S8 358 aa26.5■■□□□ 1.83
MMP28-203ENST00000612672 B4GALT3O60512 393 aa26.5■■□□□ 1.83
MMP28-203ENST00000612672 ITIH3Q06033 890 aa26.5■■□□□ 1.83
MMP28-203ENST00000612672 DHX32Q7L7V1 743 aaKnown RBP26.5■■□□□ 1.83
MMP28-203ENST00000612672 UBALD2Q8IYN6 164 aa26.5■■□□□ 1.83
MMP28-203ENST00000612672 NECTIN4Q96NY8 510 aa26.5■■□□□ 1.83
MMP28-203ENST00000612672 VN1R3Q9BXE9 311 aa26.5■■□□□ 1.83
MMP28-203ENST00000612672 ESYT2A0FGR8 921 aa26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms