RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 MTF2Q9Y483 593 aaPredicted RBP8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TRPV2Q9Y5S1 764 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IRAK3Q9Y616 596 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 COL4A3Q01955 1670 aa8.32□□□□□ -1.08
PTCHD3P1-201ENST00000612350 KDM3AQ9Y4C1 1321 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 KANSL1LA0AUZ9 987 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RNF113AO15541 343 aaKnown RBP8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CFBP00751 764 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RETP07949 1114 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FGRP09769 529 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PPFIA1Q13136 1202 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GRIK4Q16099 956 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CSRP2Q16527 193 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TMEM266Q2M3C6 531 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SOWAHCQ53LP3 525 aaPredicted RBP8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LAIR1Q6GTX8 287 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FAM43BQ6ZT52 329 aaPredicted RBP8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SLC24A5Q71RS6 500 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CYFIP1Q7L576 1253 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CABP7Q86V35 215 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 KBTBD3Q8NAB2 608 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 KCTD12Q96CX2 325 aaKnown RBP8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MYADMQ96S97 322 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ADAM2Q99965 735 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CELF4Q9BZC1 486 aaKnown RBP8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 OSBPL6Q9BZF3 934 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NACAP1Q9BZK3 213 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZBP1Q9H171 429 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 C1orf112Q9NSG2 853 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TCP11L1Q9NUJ3 509 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MRPL11Q9Y3B7 192 aaKnown RBP8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IGF2RP11717 2491 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MYH6P13533 1939 aa8.31□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CEP295Q9C0D2 2601 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SPATA31C2B4DYI2 1134 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ANHXE9PGG2 379 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FOXP2O15409 715 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ORC4O43929 436 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RPLP2P05387 115 aaKnown RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GOLGA8HP0CJ92 632 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TDGF1P13385 188 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LIMK1P53667 647 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TMEM62Q0P6H9 643 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NEDD9Q14511 834 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 WTAPQ15007 396 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LPAL2Q16609 132 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 QRICH1Q2TAL8 776 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 C15orf39Q6ZRI6 1047 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SMC5Q8IY18 1101 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 AUTS2Q8WXX7 1259 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZDHHC16Q969W1 377 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SHDQ96IW2 340 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SEC62Q99442 399 aaKnown RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FAM126AQ9BYI3 521 aaPredicted RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TMEM117Q9H0C3 514 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FAM49AQ9H0Q0 323 aaPredicted RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NAPBQ9H115 298 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 BCL11AQ9H165 835 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ELAC1Q9H777 363 aaKnown RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ATP6V0A4Q9HBG4 840 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 WDR6Q9NNW5 1121 aaKnown RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PRMT8Q9NR22 394 aaPredicted RBP8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TMEM161AQ9NX61 479 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 WASF3Q9UPY6 502 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 LAMA4Q16363 1823 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TMEM8BA6NDV4 472 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FAM170BA6NMN3 283 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CTSAP10619 480 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CCND2P30279 289 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GBP2P32456 591 aaPredicted RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GPC5P78333 572 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IRX6P78412 446 aaPredicted RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MRPS9P82933 396 aaKnown RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GPATCH4Q5T3I0 446 aaKnown RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 IL31Q6EBC2 164 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ADGRF4Q8IZF3 695 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 VPS52Q8N1B4 723 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CELF5Q8N6W0 485 aaKnown RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 TMEM40Q8WWA1 233 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 BBXQ8WY36 941 aaPredicted RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 CLDN23Q96B33 292 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GPATCH3Q96I76 525 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 INPP4AQ96PE3 977 aaPredicted RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RPP25Q9BUL9 199 aaKnown RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 RHOBTB2Q9BYZ6 727 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 MAP3K20Q9NYL2 800 aaKnown RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ANAPC4Q9UJX5 808 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NOC2LQ9Y3T9 749 aaKnown RBP8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 PCDHA2Q9Y5H9 948 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 FRYQ5TBA9 3013 aa8.29□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GCN1Q92616 2671 aaKnown RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 SPEGQ15772 3267 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 GSTTP1A0A1W2PQM5 241 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 NT5C1B-RDH14C9J2C7 533 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 M0QZ92 97 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 KCNK5O95279 499 aa8.28□□□□□ -1.08
PTCHD3P1-201ENST00000612350 ZFYP08048 801 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms