RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 ARL13BQ3SXY8 428 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 KBTBD3Q8NAB2 608 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 CRYMQ14894 314 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 SARM1Q6SZW1 724 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 KRT73Q86Y46 540 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 STAG2Q8N3U4 1231 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 ZNF473Q8WTR7 871 aaKnown RBP13.18□□□□□ -0.3
HLCS-207ENST00000612277 SSH2Q76I76 1423 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 DTNBO60941 627 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 TSPAN9O75954 239 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 KCNA2P16389 499 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 ODR4Q5SWX8 454 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 GALNT4Q8N4A0 578 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 KCNK16Q96T55 309 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 LAD1O00515 517 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 SRP72O76094 671 aaKnown RBP13.18□□□□□ -0.3
HLCS-207ENST00000612277 KDSRQ06136 332 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 C19orf44Q9H6X5 657 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 LCMT1Q9UIC8 334 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 MAN1B1Q9UKM7 699 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 SPATA2Q9UM82 520 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 PCDHGB4Q9UN71 923 aa13.18□□□□□ -0.3
HLCS-207ENST00000612277 E7ENQ6 273 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 ASNA1O43681 348 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 NUP107P57740 925 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 MXD4Q14582 209 aaPredicted RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 ADRM1Q16186 407 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 CENPPQ6IPU0 288 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 GSPT2Q8IYD1 628 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 OTUD7AQ8TE49 926 aaPredicted RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 PLEKHA8Q96JA3 519 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 ABCC12Q96J65 1359 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 TBKBP1A7MCY6 615 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 TRIM24O15164 1050 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 DDAH1O94760 285 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 EIF2B2P49770 351 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 POU5F1BQ06416 359 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 MAPRE1Q15691 268 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 TADA1Q96BN2 335 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 RBM41Q96IZ5 413 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 CCDC87Q9NVE4 849 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 SLC8A2Q9UPR5 921 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 RWDD3Q9Y3V2 267 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 FAM32AQ9Y421 112 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 UBE4BO95155 1302 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 RNF103O00237 685 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 SNPHO15079 494 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 CYTH3O43739 400 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 ACADSP16219 412 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 RPS6P62753 249 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 PUDPQ08623 228 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 MDH1BQ5I0G3 518 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 TTC13Q8NBP0 860 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 PRMT1Q99873 361 aaKnown RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 GRID2IPA4D2P6 1211 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 PLOD1Q02809 727 aaPredicted RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 PTPN21Q16825 1174 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 PALMO75781 387 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 PPARAQ07869 468 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
HLCS-207ENST00000612277 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
HLCS-207ENST00000612277 HNRNPDLO14979 420 aaKnown RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 DPCR1Q3MIW9 517 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 FAM160B1Q5W0V3 765 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 VIPAS39Q9H9C1 493 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 PCDHA5Q9Y5H7 936 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 VAMP4O75379 141 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 ADAMTS2O95450 1211 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 VHLP40337 213 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 MRPS25P82663 173 aaKnown RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 TRIP10Q15642 601 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 ARMC3Q5W041 872 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 OLFM1Q99784 485 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 SPRTNQ9H040 489 aaPredicted RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 HPS5Q9UPZ3 1129 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 KIF24Q5T7B8 1368 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 PDZK1P1A8MUH7 402 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 TK2O00142 265 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 ZBTB7BO15156 539 aaPredicted RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 IL12RB1P42701 662 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 FAM47AQ5JRC9 791 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 TTC33Q6PID6 262 aaPredicted RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 OLFML1Q6UWY5 402 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 ARPP21Q9UBL0 812 aaPredicted RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 FBXL5Q9UKA1 691 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 TARSL2A2RTX5 802 aaKnown RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 MIF4GDA9UHW6 222 aaKnown RBP13.16□□□□□ -0.3
HLCS-207ENST00000612277 PSMA2P25787 234 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 TIMM10P62072 90 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 PTGDRQ13258 359 aa13.16□□□□□ -0.3
HLCS-207ENST00000612277 KPNB1Q14974 876 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms