RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 PCDHA1Q9Y5I3 950 aa20.76■□□□□ 0.91
SEMA3B-210ENST00000611067 TRAF5O00463 557 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 STAT2P52630 851 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 BYSLQ13895 437 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 APOBEC3FQ8IUX4 373 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 RAPGEF5Q92565 580 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 CEP63Q96MT8 703 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 SYT17Q9BSW7 474 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 NEUROG2Q9H2A3 272 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 BCCIPQ9P287 314 aaKnown RBP eCLIP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 CNOT8Q9UFF9 292 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 FBXL5Q9UKA1 691 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 ATAD5Q96QE3 1844 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 SBF1O95248 1867 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 SART1O43290 800 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 SCTRP47872 440 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 IFFO1Q0D2I5 559 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 XRCC4Q13426 336 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 ASIC2Q16515 512 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 IFI16Q16666 785 aaKnown RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 BTNL9Q6UXG8 535 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 FAM228AQ86W67 206 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 DDX42Q86XP3 938 aaKnown RBP eCLIP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 FAM133AQ8N9E0 248 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 UBLCP1Q8WVY7 318 aaPredicted RBP20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 AMNQ9BXJ7 453 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 PSTPIP2Q9H939 334 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 TMEM260Q9NX78 707 aa20.75■□□□□ 0.91
SEMA3B-210ENST00000611067 CCDC188H7C350 402 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 CEP104O60308 925 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 GNA14O95837 355 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 MARSP56192 900 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 CALCRLQ16602 461 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 TMEM266Q2M3C6 531 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 ANGEL2Q5VTE6 544 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 PAXIP1Q6ZW49 1069 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 HAUS2Q9NVX0 235 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 NOVA2Q9UNW9 492 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 PHF20L1A8MW92 1017 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 PGRMC1O00264 195 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 ARID5AQ03989 594 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 ZYXQ15942 572 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 GKAP1Q5VSY0 366 aaPredicted RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 TRIM59Q8IWR1 403 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 RAB34Q9BZG1 259 aa20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 TPX2Q9ULW0 747 aaKnown RBP20.74■□□□□ 0.91
SEMA3B-210ENST00000611067 GHRP10912 638 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 PDIA5Q14554 519 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 DCAF15Q66K64 600 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 TRPM4Q8TD43 1214 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 N4BP2L2Q92802 583 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 HOOK2Q96ED9 719 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.73■□□□□ 0.911e-10■■□□□ 13.2
SEMA3B-210ENST00000611067 KDM4CQ9H3R0 1056 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.73■□□□□ 0.918e-7■■□□□ 11.8
SEMA3B-210ENST00000611067 ZBTB48P10074 688 aaPredicted RBP20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 UBE2SQ16763 222 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 FBXO11Q86XK2 927 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 LRRC57Q8N9N7 239 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 CCT6BQ92526 530 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 GANQ9H2C0 597 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 GINM1Q9NU53 330 aa20.73■□□□□ 0.91
SEMA3B-210ENST00000611067 MYH7BA7E2Y1 1941 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 DNAJC8O75937 253 aaPredicted RBP20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 FLT3P36888 993 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 MAGOHP61326 146 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 COASYQ13057 564 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 TMEM119Q4V9L6 283 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 TMC3Q7Z5M5 1100 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 CEP57Q86XR8 500 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 MAGOHBQ96A72 148 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 AP1M1Q9BXS5 423 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 PRR12Q9ULL5 1215 aa20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 NOC2LQ9Y3T9 749 aaKnown RBP20.72■□□□□ 0.91
SEMA3B-210ENST00000611067 CTNND1O60716 968 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 EZRP15311 586 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 SLC8A1P32418 973 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 KIAA1755Q5JYT7 1200 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 NBPF12Q5TAG4 269 aaPredicted RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 KRT79Q5XKE5 535 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 SNX29Q8TEQ0 813 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 CHURC1Q8WUH1 139 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 SEC14L1Q92503 715 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 DNAJC19Q96DA6 116 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 ZNF341Q9BYN7 854 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 DDX47Q9H0S4 455 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 SLITRK6Q9H5Y7 841 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 CNOT10Q9H9A5 744 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 GGA3Q9NZ52 723 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 RNF181Q9P0P0 153 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 CLK2P49760 499 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 SNAP25P60880 206 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 ENOX2Q16206 610 aaKnown RBP20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 KCNK18Q7Z418 384 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 CPLX4Q7Z7G2 160 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 METTL13Q8N6R0 699 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 MIEF2Q96C03 454 aa20.71■□□□□ 0.91
SEMA3B-210ENST00000611067 POTEMA6NI47 508 aa20.7■□□□□ 0.9
SEMA3B-210ENST00000611067 MGRN1O60291 552 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms