RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 DRAXINQ8NBI3 349 aaPredicted RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 KIAA0895Q8NCT3 520 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 TCP11L1Q9NUJ3 509 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 BOLA1Q9Y3E2 137 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 NOC2LQ9Y3T9 749 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 USP15Q9Y4E8 981 aaPredicted RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 LRRD1A4D1F6 860 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 SMIM24O75264 130 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 NPTXRO95502 500 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 LDHBP07195 334 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 PLCG1P19174 1290 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 PRDX5P30044 214 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 KCNMA1Q12791 1236 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 C6orf118Q5T5N4 469 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 COL23A1Q86Y22 540 aaPredicted RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 SPICE1Q8N0Z3 855 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 GALNT15Q8N3T1 639 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 SRBD1Q8N5C6 995 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 MTMR14Q8NCE2 650 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 PLIN2Q99541 437 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 PRMT1Q99873 361 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 AP1M1Q9BXS5 423 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 STMN4Q9H169 189 aaPredicted RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 PABPC3Q9H361 631 aaKnown RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 DCP1AQ9NPI6 582 aaPredicted RBP12.94□□□□□ -0.34
TP53-220ENST00000610623 SH3GLB2Q9NR46 395 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 ADAM22Q9P0K1 906 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 AMACRQ9UHK6 382 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 USTQ9Y2C2 406 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 ATP8A1Q9Y2Q0 1164 aa12.94□□□□□ -0.34
TP53-220ENST00000610623 USP17L12C9JPN9 530 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 USP17L21D6R901 530 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 O00370 1275 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 SUN1O94901 812 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 SERPINB2P05120 415 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 LDHCP07864 332 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 KRT16P08779 473 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 CNGA1P29973 690 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 SKIV2L2P42285 1042 aaKnown RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 LBRQ14739 615 aaKnown RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 ASRGL1Q7L266 308 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 CABP7Q86V35 215 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 LMNTD2Q8IXW0 634 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 GUF1Q8N442 669 aaKnown RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 PRCCQ92733 491 aaPredicted RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 NLRC4Q9NPP4 1024 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 A0A087X0T9 212 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 RGS16O15492 202 aaPredicted RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 HIP1RO75146 1068 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 FAM228BP0C875 321 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 ZBTB48P10074 688 aaPredicted RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 GBP1P32455 592 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 SNX1Q13596 522 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 PPP2R5EQ16537 467 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 SGSM1Q2NKQ1 1148 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 MTHFD1LQ6UB35 978 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 KRT27Q7Z3Y8 459 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 TXNRD3Q86VQ6 643 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 LRRC57Q8N9N7 239 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 NEK9Q8TD19 979 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 LRRC15Q8TF66 581 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.93□□□□□ -0.34
TP53-220ENST00000610623 ZMYND12Q9H0C1 365 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 AIPL1Q9NZN9 384 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 CNOT7Q9UIV1 285 aaKnown RBP12.93□□□□□ -0.34
TP53-220ENST00000610623 PCDHA4Q9UN74 947 aa12.93□□□□□ -0.34
TP53-220ENST00000610623 MYH1P12882 1939 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 FLT1P17948 1338 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 DPPA5A6NC42 116 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 TTI1O43156 1089 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 BBOX1O75936 387 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 NOL4O94818 638 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 GNAT1P11488 350 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 DENND2CQ68D51 928 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 METTL13Q8N6R0 699 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 RAB3IPQ96QF0 476 aaPredicted RBP12.92□□□□□ -0.34
TP53-220ENST00000610623 FAM167BQ9BTA0 163 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 TMEM60Q9H2L4 133 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 LRRC4CQ9HCJ2 640 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 ADAMTS1Q9UHI8 967 aa12.92□□□□□ -0.34
TP53-220ENST00000610623 CCDC194A0A1B0GVG4 234 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 PVALEFA0A1B0GWK0 134 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 BAG3O95817 575 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 HOXA10P31260 410 aaPredicted RBP12.91□□□□□ -0.34
TP53-220ENST00000610623 PMS2P54278 862 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 KLHL30Q0D2K2 578 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 BTNL9Q6UXG8 535 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 TAOK1Q7L7X3 1001 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 CRAMP1Q96RY5 1269 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 TMEM109Q9BVC6 243 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 TRIM7Q9C029 511 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 TANGO6Q9C0B7 1094 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 RXFP1Q9HBX9 757 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 ATP8B3O60423 1300 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 CYP2D7A0A087X1C5 515 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 GPR75-ASB3A0A0A6YYF3 556 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 PPP4CP60510 307 aa12.91□□□□□ -0.34
TP53-220ENST00000610623 MXRA7P84157 204 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms