RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 RSRC1Q96IZ7 334 aaKnown RBP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 NT5C1BQ96P26 610 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 NKRFO15226 690 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 ATMINO43313 823 aaPredicted RBP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 ATF2P15336 505 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 PRLRP16471 622 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 PON1P27169 355 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 HP1BP3Q5SSJ5 553 aaPredicted RBP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 LIN9Q5TKA1 542 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 NUGGCQ68CJ6 796 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 PPP1R18Q6NYC8 613 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 C1orf54Q8WWF1 131 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 IFT74Q96LB3 600 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 RUSC1Q9BVN2 902 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 WDR11Q9BZH6 1224 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 RIOX1Q9H6W3 641 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 SALL4Q9UJQ4 1053 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF148Q9UQR1 794 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 EMSYQ7Z589 1322 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 SLC16A4O15374 487 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 CD19P15391 556 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 SSTR3P32745 418 aaPredicted RBP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 AARSP49588 968 aaKnown RBP eCLIP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 PMS2P54278 862 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 KCNMA1Q12791 1236 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 EDRF1Q3B7T1 1238 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 PADI6Q6TGC4 694 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 NLRX1Q86UT6 975 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 TPCN2Q8NHX9 752 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 SAAL1Q96ER3 474 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 ADAM33Q9BZ11 813 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 IQCGQ9H095 443 aaKnown RBP7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 C1orf112Q9NSG2 853 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 ABCB11O95342 1321 aa7.41□□□□□ -1.22
SYNPO2-206ENST00000610556 CASP5P51878 434 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 MFAP3P55082 362 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 KCNA1Q09470 495 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 PRKG1Q13976 671 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 PTGISQ16647 500 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 CC2D2BQ6DHV5 1058 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 LRRC55Q6ZSA7 311 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 CROCCP2Q86T23 111 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 DCAF4Q8WV16 495 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ACCSQ96QU6 501 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 MYCBPQ99417 103 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 LXNQ9BS40 222 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 FGFBP2Q9BYJ0 223 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 FAM53CQ9NYF3 392 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 SCAF8Q9UPN6 1271 aaKnown RBP7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 AFDNP55196 1824 aaKnown RBP7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 LTBP4Q8N2S1 1624 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 A0A1B0GUA9 196 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 EYA4O95677 639 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 MMP10P09238 476 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 PDE6BP35913 854 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 NSFP46459 744 aaKnown RBP7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 FMO5P49326 533 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ZNF131P52739 623 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 EIF3BP55884 814 aaKnown RBP7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 GPC5P78333 572 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 STRN3Q13033 797 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ECM1Q16610 540 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 TTMPQ5BVD1 217 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 HHATQ5VTY9 493 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 RHOT2Q8IXI1 618 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 SLC30A5Q8TAD4 765 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 BAP1Q92560 729 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 MTMR9Q96QG7 549 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 TRIM7Q9C029 511 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ISCUQ9H1K1 167 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 KLHL14Q9P2G3 628 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ANKFY1Q9P2R3 1169 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ANAPC7Q9UJX3 599 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 ODF2LQ9ULJ1 636 aa7.4□□□□□ -1.22
SYNPO2-206ENST00000610556 IPO5O00410 1097 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 CYP26A1O43174 497 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 HIP1RO75146 1068 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 FGRP09769 529 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 RPA1P27694 616 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 ALDH3A1P30838 453 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 HNRNPH1P31943 449 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 ERVK-9P63128 1117 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 ATP11AP98196 1134 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 DMP1Q13316 513 aaPredicted RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 GIT2Q14161 759 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 CLUL1Q15846 466 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 MEI1Q5TIA1 1274 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 ARHGEF16Q5VV41 709 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 CCDC137Q6PK04 289 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 FAM47EQ6ZV65 393 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 PASD1Q8IV76 773 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 MYCBPAPQ8TBZ2 947 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 KLHL29Q96CT2 875 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 HVCN1Q96D96 273 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 CYFIP2Q96F07 1278 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 SLITRK6Q9H5Y7 841 aa7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 DDX4Q9NQI0 724 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 CNOT8Q9UFF9 292 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 DBR1Q9UK59 544 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-206ENST00000610556 ZBTB39O15060 712 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms