RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 PIGOQ8TEQ8 1089 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 FDXACB1Q9BRP7 624 aaPredicted RBP16.2■□□□□ 0.18
HDDC2-204ENST00000608295 ADAMTS10Q9H324 1103 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 ZSWIM4Q9H7M6 989 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 HCSTQ9UBK5 93 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
HDDC2-204ENST00000608295 FNDC1Q4ZHG4 1894 aaPredicted RBP16.2■□□□□ 0.18
HDDC2-204ENST00000608295 GPR182O15218 404 aa16.19■□□□□ 0.18
HDDC2-204ENST00000608295 GTPBP6O43824 516 aaPredicted RBP16.19■□□□□ 0.18
HDDC2-204ENST00000608295 DKC1O60832 514 aaKnown RBP eCLIP16.19■□□□□ 0.18
HDDC2-204ENST00000608295 DNM2P50570 870 aa16.19■□□□□ 0.18
HDDC2-204ENST00000608295 BTG3Q14201 252 aaPredicted RBP16.19■□□□□ 0.18
HDDC2-204ENST00000608295 POTEGQ6S5H5 508 aa16.19■□□□□ 0.18
HDDC2-204ENST00000608295 MAEAQ7L5Y9 396 aa16.19■□□□□ 0.18
HDDC2-204ENST00000608295 FIBCD1Q8N539 461 aa16.19■□□□□ 0.18
HDDC2-204ENST00000608295 SP7Q8TDD2 431 aaPredicted RBP16.19■□□□□ 0.18
HDDC2-204ENST00000608295 FTHL17Q9BXU8 183 aa16.19■□□□□ 0.18
HDDC2-204ENST00000608295 TSPYL2Q9H2G4 693 aaPredicted RBP16.19■□□□□ 0.18
HDDC2-204ENST00000608295 USO1O60763 962 aaKnown RBP16.18■□□□□ 0.18
HDDC2-204ENST00000608295 MAFO75444 373 aaPredicted RBP16.18■□□□□ 0.18
HDDC2-204ENST00000608295 MED24O75448 989 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 SLITRK3O94933 977 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 FGFR1P11362 822 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 DARSP14868 501 aaKnown RBP16.18■□□□□ 0.18
HDDC2-204ENST00000608295 MCM2P49736 904 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
HDDC2-204ENST00000608295 ERVK-21P61565 698 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 LONRF3Q496Y0 759 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 NPAS4Q8IUM7 802 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 C4orf19Q8IY42 314 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 MTCH2Q9Y6C9 303 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 SQORQ9Y6N5 450 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 PRUNE2Q8WUY3 3088 aa16.18■□□□□ 0.18
HDDC2-204ENST00000608295 IGKV6-21A0A0C4DH24 114 aa16.17■□□□□ 0.18
HDDC2-204ENST00000608295 VPS37CA5D8V6 355 aaPredicted RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 LPXNO60711 386 aa16.17■□□□□ 0.18
HDDC2-204ENST00000608295 SRGAP2CP0DJJ0 459 aa16.17■□□□□ 0.18
HDDC2-204ENST00000608295 EIF4BP23588 611 aaKnown RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 U2AF2P26368 475 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■□□□□ 9.1
HDDC2-204ENST00000608295 SARSP49591 514 aaKnown RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 EPC2Q52LR7 807 aa16.17■□□□□ 0.18
HDDC2-204ENST00000608295 MTRQ99707 1265 aa16.17■□□□□ 0.18
HDDC2-204ENST00000608295 RC3H2Q9HBD1 1191 aaKnown RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 PIN4Q9Y237 131 aaKnown RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
HDDC2-204ENST00000608295 MRPL42Q9Y6G3 142 aaKnown RBP16.17■□□□□ 0.18
HDDC2-204ENST00000608295 PLXNA4Q9HCM2 1894 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 PP2D1A8MPX8 630 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 DGKIO75912 1065 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 STAG3L1P0CL83 205 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 RFC5P40937 340 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 PTGDRQ13258 359 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 ODR4Q5SWX8 454 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 SPOUT1Q5T280 376 aaKnown RBP16.16■□□□□ 0.18
HDDC2-204ENST00000608295 FAM102BQ5T8I3 360 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 OTUD6AQ7L8S5 288 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 TMEM192Q8IY95 271 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 NEK9Q8TD19 979 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
HDDC2-204ENST00000608295 GCOM2Q9BZD3 368 aaPredicted RBP16.16■□□□□ 0.18
HDDC2-204ENST00000608295 DHX33Q9H6R0 707 aaKnown RBP16.16■□□□□ 0.18
HDDC2-204ENST00000608295 XPNPEP1Q9NQW7 623 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 PCDHB7Q9Y5E2 793 aa16.16■□□□□ 0.18
HDDC2-204ENST00000608295 C9IYK1 514 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 SPATA31C1P0DKV0 1188 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 CCT6AP40227 531 aaKnown RBP16.15■□□□□ 0.18
HDDC2-204ENST00000608295 RARRES1P49788 294 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 GPM6BQ13491 265 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 DSC3Q14574 896 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 ZRSR1Q15695 479 aaKnown RBP16.15■□□□□ 0.18
HDDC2-204ENST00000608295 LARP1BQ659C4 914 aaKnown RBP16.15■□□□□ 0.18
HDDC2-204ENST00000608295 CATSPER4Q7RTX7 472 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 CATSPER3Q86XQ3 398 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 ERMNQ8TAM6 284 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 PRPF31Q8WWY3 499 aaKnown RBP16.15■□□□□ 0.18
HDDC2-204ENST00000608295 HSD17B14Q9BPX1 270 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 ATP6V0A4Q9HBG4 840 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
HDDC2-204ENST00000608295 REV3LO60673 3130 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 ZSCAN20P17040 1043 aaPredicted RBP16.14■□□□□ 0.17
HDDC2-204ENST00000608295 SFPQP23246 707 aaKnown RBP eCLIP16.14■□□□□ 0.17
HDDC2-204ENST00000608295 CDC25AP30304 524 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 TRAPPC10P48553 1259 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 LAMTOR4Q0VGL1 99 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 TWF2Q6IBS0 349 aaKnown RBP16.14■□□□□ 0.17
HDDC2-204ENST00000608295 SLC24A5Q71RS6 500 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 ASAP3Q8TDY4 903 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 SNX29Q8TEQ0 813 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 ZNF689Q96CS4 500 aaPredicted RBP16.14■□□□□ 0.17
HDDC2-204ENST00000608295 JPH2Q9BR39 696 aaPredicted RBP16.14■□□□□ 0.17
HDDC2-204ENST00000608295 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
HDDC2-204ENST00000608295 MINDY3Q9H8M7 445 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 C1orf112Q9NSG2 853 aa16.14■□□□□ 0.17
HDDC2-204ENST00000608295 TRANK1O15050 2925 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms