RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
LINC01001-203ENST00000607448 SERPINC1P01008 464 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 ACTN1P12814 892 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 INSRRP14616 1297 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 TOB1P50616 345 aaPredicted RBP11.74□□□□□ -0.53
LINC01001-203ENST00000607448 UBASH3AP57075 661 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 PPFIA1Q13136 1202 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 POSTNQ15063 836 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 LONRF3Q496Y0 759 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 ARMCX5Q6P1M9 558 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 CNKSR3Q6P9H4 555 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 ABHD15Q6UXT9 468 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 TBCKQ8TEA7 893 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 ZNF577Q9BSK1 485 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 SMARCAD1Q9H4L7 1026 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 PRDM12Q9H4Q4 367 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 BRMS1Q9HCU9 246 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 PCDHA4Q9UN74 947 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 PCDHA5Q9Y5H7 936 aa11.74□□□□□ -0.53
LINC01001-203ENST00000607448 CA3P07451 260 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 ATP4AP20648 1035 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 CIITAP33076 1130 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 KRT2P35908 639 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 SARSP49591 514 aaKnown RBP11.73□□□□□ -0.53
LINC01001-203ENST00000607448 MKRN4PQ13434 485 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-203ENST00000607448 RAB30Q15771 203 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.73□□□□□ -0.53
LINC01001-203ENST00000607448 VSTM4Q8IW00 320 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 SMAP1Q8IYB5 467 aaPredicted RBP11.73□□□□□ -0.53
LINC01001-203ENST00000607448 BLIDQ8IZY5 108 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 DBF4BQ8NFT6 615 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 ENOX1Q8TC92 643 aaKnown RBP11.73□□□□□ -0.53
LINC01001-203ENST00000607448 SMARCE1Q969G3 411 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 PHF20Q9BVI0 1012 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 HSD3B7Q9H2F3 369 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 MUC3AQ02505 3323 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 ATG2AQ2TAZ0 1938 aa11.73□□□□□ -0.53
LINC01001-203ENST00000607448 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 MBLAC1A4D2B0 266 aaPredicted RBP11.72□□□□□ -0.53
LINC01001-203ENST00000607448 USP27XA6NNY8 438 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 MSH4O15457 936 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 BAIAP3O94812 1187 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 TDP2O95551 362 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 CHRNA1P02708 482 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 GNAT1P11488 350 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 FOSL2P15408 326 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 STAT5BP51692 787 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 SETQ01105 290 aaPredicted RBP11.72□□□□□ -0.53
LINC01001-203ENST00000607448 NCBP1Q09161 790 aaKnown RBP11.72□□□□□ -0.53
LINC01001-203ENST00000607448 MGAT3Q09327 533 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 PLEKHG4Q58EX7 1191 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 EARS2Q5JPH6 523 aaKnown RBP11.72□□□□□ -0.53
LINC01001-203ENST00000607448 HERC6Q8IVU3 1022 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 DAGLBQ8NCG7 672 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 OXER1Q8TDS5 423 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 DNAJB3Q8WWF6 145 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 TSC1Q92574 1164 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 SLC9A7Q96T83 725 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 PYM1Q9BRP8 204 aaKnown RBP11.72□□□□□ -0.53
LINC01001-203ENST00000607448 AZI2Q9H6S1 392 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 SLC28A3Q9HAS3 691 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 MSRAQ9UJ68 235 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 MAN1B1Q9UKM7 699 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 PCDHA11Q9Y5I1 949 aa11.72□□□□□ -0.53
LINC01001-203ENST00000607448 LCHNA4D1U4 455 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.53
LINC01001-203ENST00000607448 PRKCSHP14314 528 aaPredicted RBP11.71□□□□□ -0.53
LINC01001-203ENST00000607448 ERCC5P28715 1186 aaPredicted RBP11.71□□□□□ -0.53
LINC01001-203ENST00000607448 TMEM62Q0P6H9 643 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 MORC3Q14149 939 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 ADGRE1Q14246 886 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 E4F1Q66K89 784 aaPredicted RBP11.71□□□□□ -0.53
LINC01001-203ENST00000607448 PPP2R2DQ66LE6 453 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 SWSAP1Q6NVH7 229 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 FAM117BQ6P1L5 589 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 PLPPR4Q7Z2D5 763 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 TRMT1LQ7Z2T5 733 aaKnown RBP11.71□□□□□ -0.53
LINC01001-203ENST00000607448 ZNF592Q92610 1267 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 CERS4Q9HA82 394 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 ARID2Q68CP9 1835 aa11.71□□□□□ -0.53
LINC01001-203ENST00000607448 COL4A6Q14031 1691 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 POTEB3A0JP26 581 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 GOLGA6L9A6NEM1 432 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 FAM205CA6NFA0 338 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 EPOPA6NHQ4 379 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 RFXAPO00287 272 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 BACH1O14867 736 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 POLR2DO15514 142 aaKnown RBP11.71□□□□□ -0.54
LINC01001-203ENST00000607448 SLC37A4O43826 429 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 TRAPPC10P48553 1259 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 USP11P51784 963 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 INF2Q27J81 1249 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 FAM26DQ5JW98 314 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 POTEBQ6S5H4 581 aa11.71□□□□□ -0.54
LINC01001-203ENST00000607448 USP38Q8NB14 1042 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms