RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 TMEM87AQ8NBN3 555 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 MRPS27Q92552 414 aaKnown RBP16.78■□□□□ 0.28
CTSA-216ENST00000607212 CCDC136Q96JN2 1154 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 KCNH6Q9H252 994 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 CWH43Q9H720 699 aa16.78■□□□□ 0.28
CTSA-216ENST00000607212 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
CTSA-216ENST00000607212 FGFR4P22455 802 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 PPM1AP35813 382 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 PBX3P40426 434 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 MRE11P49959 708 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 JAK3P52333 1124 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 PKN1Q16512 942 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 LRCH2Q5VUJ6 765 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 KCNT2Q6UVM3 1135 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 TRIM67Q6ZTA4 783 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 CRYGNQ8WXF5 182 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 TSHZ2Q9NRE2 1034 aa16.77■□□□□ 0.28
CTSA-216ENST00000607212 LOC730098B7Z3J9 87 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 MSH4O15457 936 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 RPS6KB1P23443 525 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 EIF4BP23588 611 aaKnown RBP16.76■□□□□ 0.27
CTSA-216ENST00000607212 PSMA5P28066 241 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 FAM189BP81408 668 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 ZXDAP98168 799 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 DSC3Q14574 896 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 BMS1Q14692 1282 aaKnown RBP16.76■□□□□ 0.27
CTSA-216ENST00000607212 MTERF2Q49AM1 385 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 MIER3Q7Z3K6 550 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 ECHDC2Q86YB7 292 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 TRIM22Q8IYM9 498 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 HELQQ8TDG4 1101 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 CASD1Q96PB1 797 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 RNF26Q9BY78 433 aaPredicted RBP16.76■□□□□ 0.27
CTSA-216ENST00000607212 SPG21Q9NZD8 308 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 LZTS1Q9Y250 596 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
CTSA-216ENST00000607212 FSCN2O14926 492 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 SFNP31947 248 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 CIITAP33076 1130 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 GPC3P51654 580 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 PLCB3Q01970 1234 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 ZNF710Q8N1W2 664 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 VN1R2Q8NFZ6 395 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 GJA10Q969M2 543 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 GCOM2Q9BZD3 368 aaPredicted RBP16.75■□□□□ 0.27
CTSA-216ENST00000607212 ADAMTS10Q9H324 1103 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 UNC45AQ9H3U1 944 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 NCOA5Q9HCD5 579 aaKnown RBP16.75■□□□□ 0.27
CTSA-216ENST00000607212 NGRNQ9NPE2 291 aaKnown RBP16.75■□□□□ 0.27
CTSA-216ENST00000607212 DACT1Q9NYF0 836 aa16.75■□□□□ 0.27
CTSA-216ENST00000607212 CPLX1O14810 134 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 ZNF862O60290 1169 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 CSDE1O75534 798 aaKnown RBP16.74■□□□□ 0.27
CTSA-216ENST00000607212 DARSP14868 501 aaKnown RBP16.74■□□□□ 0.27
CTSA-216ENST00000607212 ATF7P17544 494 aaPredicted RBP16.74■□□□□ 0.27
CTSA-216ENST00000607212 HSPA4P34932 840 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 DNM2P50570 870 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 SSRP1Q08945 709 aaKnown RBP16.74■□□□□ 0.27
CTSA-216ENST00000607212 SMC1AQ14683 1233 aaKnown RBP16.74■□□□□ 0.27
CTSA-216ENST00000607212 CBX2Q14781 532 aaPredicted RBP16.74■□□□□ 0.27
CTSA-216ENST00000607212 UGCGQ16739 394 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 LRRC55Q6ZSA7 311 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 RIT2Q99578 217 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 TECTAO75443 2155 aa16.74■□□□□ 0.27
CTSA-216ENST00000607212 SPDYE4A6NLX3 237 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 HIDE1A8MVS5 230 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 REC8O95072 547 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 ALDH7A1P49419 539 aaKnown RBP16.73■□□□□ 0.27
CTSA-216ENST00000607212 USP11P51784 963 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 LONRF3Q496Y0 759 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 TPRNQ4KMQ1 711 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 TWF2Q6IBS0 349 aaKnown RBP16.73■□□□□ 0.27
CTSA-216ENST00000607212 CES5AQ6NT32 575 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 CASP10Q92851 521 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 LENG9Q96B70 501 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 TMEM169Q96HH4 297 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 MRPL9Q9BYD2 267 aaKnown RBP16.73■□□□□ 0.27
CTSA-216ENST00000607212 C22orf23Q9BZE7 217 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 RNF19AQ9NV58 838 aa16.73■□□□□ 0.27
CTSA-216ENST00000607212 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 NT5C1B-RDH14C9J2C7 533 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 ZC3H11AO75152 810 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSA-216ENST00000607212 IFNAR1P17181 557 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 SFPQP23246 707 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSA-216ENST00000607212 SIGLEC14Q08ET2 396 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 CLLU1OSQ5K130 101 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 LINC01465Q8N7H1 131 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 SLC5A5Q92911 643 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 SH2D3AQ9BRG2 576 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 SLKQ9H2G2 1235 aaPredicted RBP16.72■□□□□ 0.27
CTSA-216ENST00000607212 SH3GLB2Q9NR46 395 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 PCDHA4Q9UN74 947 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 INPP5FQ9Y2H2 1132 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 NR2E1Q9Y466 385 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 NID2Q14112 1375 aa16.72■□□□□ 0.27
CTSA-216ENST00000607212 TMEM150BA6NC51 233 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 MARCH6O60337 910 aa16.71■□□□□ 0.27
CTSA-216ENST00000607212 TDP2O95551 362 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms