RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 SMOC2Q9H3U7 446 aa17.02■□□□□ 0.32
SSBP4-214ENST00000607020 SLC12A7Q9Y666 1083 aa17.02■□□□□ 0.32
SSBP4-214ENST00000607020 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 KIAA1671Q9BY89 1806 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 VTNP04004 478 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 RXRAP19793 462 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 ALDH7A1P49419 539 aaKnown RBP17.01■□□□□ 0.31
SSBP4-214ENST00000607020 CLK2P49760 499 aaKnown RBP17.01■□□□□ 0.31
SSBP4-214ENST00000607020 GIT2Q14161 759 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 CLLU1OSQ5K130 101 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 SGMS1Q86VZ5 419 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 SLC22A17Q8WUG5 538 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 CYP26B1Q9NR63 512 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 RBM8AQ9Y5S9 174 aaKnown RBP17.01■□□□□ 0.31
SSBP4-214ENST00000607020 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 PLXNA4Q9HCM2 1894 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 CACNA1AO00555 2505 aa17.01■□□□□ 0.31
SSBP4-214ENST00000607020 hCG_1984214I3L0E3 225 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 CYP3A4P08684 503 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 NPR3P17342 541 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 AOC1P19801 751 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 POLGP54098 1239 aaPredicted RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 NLRP11P59045 1033 aaKnown RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 RARS2Q5T160 578 aaKnown RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 CWF19L1Q69YN2 538 aaKnown RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 ZNF746Q6NUN9 644 aaPredicted RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 METTL13Q8N6R0 699 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 ZNF713Q8N859 430 aaPredicted RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 CRYGNQ8WXF5 182 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 PGBD1Q96JS3 809 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 PPP1R16BQ96T49 567 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 MRPL9Q9BYD2 267 aaKnown RBP17■□□□□ 0.31
SSBP4-214ENST00000607020 TBC1D22BQ9NU19 505 aa17■□□□□ 0.31
SSBP4-214ENST00000607020 IGLV3-22A0A075B6J6 115 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 FAM86B1E9PN63 330 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 DDX39AO00148 427 aaKnown RBP16.99■□□□□ 0.31
SSBP4-214ENST00000607020 IPO5O00410 1097 aaKnown RBP16.99■□□□□ 0.31
SSBP4-214ENST00000607020 WEE2P0C1S8 567 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 FAM86B2P0C5J1 330 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 CTSAP10619 480 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 TMOD1P28289 359 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 ZNF76P36508 570 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 ADCY7P51828 1080 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 NAPAP54920 295 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 BCAR1P56945 870 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 FUT2Q10981 343 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 DDX53Q86TM3 631 aaKnown RBP16.99■□□□□ 0.31
SSBP4-214ENST00000607020 PLA2G4DQ86XP0 818 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 CKAP2LQ8IYA6 745 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 SMAP1Q8IYB5 467 aaPredicted RBP16.99■□□□□ 0.31
SSBP4-214ENST00000607020 CCDC105Q8IYK2 499 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 VPS52Q8N1B4 723 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 C12orf76Q8N812 135 aaPredicted RBP16.99■□□□□ 0.31
SSBP4-214ENST00000607020 RTP3Q9BQQ7 232 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 TRAIPQ9BWF2 469 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 ZBP1Q9H171 429 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 SEMA4AQ9H3S1 761 aa16.99■□□□□ 0.31
SSBP4-214ENST00000607020 DBR1Q9UK59 544 aaKnown RBP16.99■□□□□ 0.31
SSBP4-214ENST00000607020 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 DARSP14868 501 aaKnown RBP16.98■□□□□ 0.31
SSBP4-214ENST00000607020 CLCN3P51790 818 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 TDGQ13569 410 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 COL9A3Q14050 684 aaPredicted RBP16.98■□□□□ 0.31
SSBP4-214ENST00000607020 EFCAB12Q6NXP0 572 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 OTOP3Q7RTS5 596 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 PPFIBP1Q86W92 1011 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
SSBP4-214ENST00000607020 TMEM169Q96HH4 297 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 FAM167AQ96KS9 214 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 RBM28Q9NW13 759 aaKnown RBP16.98■□□□□ 0.31
SSBP4-214ENST00000607020 BARHL2Q9NY43 387 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 DACT1Q9NYF0 836 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 PCDHA10Q9Y5I2 948 aa16.98■□□□□ 0.31
SSBP4-214ENST00000607020 FNDC1Q4ZHG4 1894 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-214ENST00000607020 DCHS1Q96JQ0 3298 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 PI15O43692 258 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 PSAPP07602 524 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 EPCAMP16422 314 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 METAP2P50579 478 aaKnown RBP eCLIP16.97■□□□□ 0.317e-7■■■□□ 17.5
SSBP4-214ENST00000607020 GPR149Q86SP6 731 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 DTWD2Q8NBA8 298 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 FLCNQ8NFG4 579 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 HELQQ8TDG4 1101 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 CHST12Q9NRB3 414 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 DUSP12Q9UNI6 340 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 AKT3Q9Y243 479 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 V9GY48 417 aaPredicted RBP16.97■□□□□ 0.31
SSBP4-214ENST00000607020 VPS13AQ96RL7 3174 aa16.97■□□□□ 0.31
SSBP4-214ENST00000607020 CNTNAP5Q8WYK1 1306 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.96■□□□□ 0.31
SSBP4-214ENST00000607020 NT5C1B-RDH14C9J2C7 533 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 GPC3P51654 580 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 CDC42EP1Q00587 391 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 ANGPT1Q15389 498 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 KANK3Q6NY19 840 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
SSBP4-214ENST00000607020 CABP7Q86V35 215 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms