RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 MGEA5O60502 916 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 DARSP14868 501 aaKnown RBP24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 GJB2P29033 226 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 RFC5P40937 340 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 POLGP54098 1239 aaPredicted RBP24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 XKR9Q5GH70 373 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 ZNF579Q8NAF0 562 aaKnown RBP24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 FBXO22Q8NEZ5 403 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 RGS18Q9NS28 235 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 C1orf112Q9NSG2 853 aa24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 RNF216Q9NWF9 866 aaPredicted RBP24.47■■□□□ 1.51
PPFIA3-208ENST00000602726 DGKIO75912 1065 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 OR52Z1P0C646 297 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 SARSP49591 514 aaKnown RBP24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 BTG3Q14201 252 aaPredicted RBP24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 MCTP1Q6DN14 999 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 SLC24A5Q71RS6 500 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 RHPN2Q8IUC4 686 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 GCOM2Q9BZD3 368 aaPredicted RBP24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 SMC3Q9UQE7 1217 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 PCDHB7Q9Y5E2 793 aa24.46■■□□□ 1.51
PPFIA3-208ENST00000602726 UNC80Q8N2C7 3258 aa24.45■■□□□ 1.51
PPFIA3-208ENST00000602726 POTEMA6NI47 508 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 ZBTB39O15060 712 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 LPXNO60711 386 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 TECP42680 631 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 EPC2Q52LR7 807 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 TMEM192Q8IY95 271 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 CRIPAKQ8N1N5 446 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 ZNF689Q96CS4 500 aaPredicted RBP24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 DHX33Q9H6R0 707 aaKnown RBP24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 RC3H2Q9HBD1 1191 aaKnown RBP24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 GTF3C3Q9Y5Q9 886 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 COL4A6Q14031 1691 aa24.45■■□□□ 1.5
PPFIA3-208ENST00000602726 A0A087WZ62 844 aa24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 H3BQV1 296 aa24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 LYPLA2O95372 231 aa24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 ZSCAN20P17040 1043 aaPredicted RBP24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 ZNF410Q86VK4 478 aa24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 CCDC43Q96MW1 224 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 FDXACB1Q9BRP7 624 aaPredicted RBP24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 BMP2KQ9NSY1 1161 aaPredicted RBP24.44■■□□□ 1.5
PPFIA3-208ENST00000602726 C9IYK1 514 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 DSC3Q14574 896 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 NBR1Q14596 966 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 TMEM143Q96AN5 459 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 NLRP4Q96MN2 994 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 INO80BQ9C086 356 aaPredicted RBP24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 ANKEF1Q9NU02 776 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 LMCD1Q9NZU5 365 aa24.43■■□□□ 1.5
PPFIA3-208ENST00000602726 GAS2O43903 313 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 CSDE1O75534 798 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 FGFR4P22455 802 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 CTNNB1P35222 781 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 EMC2Q15006 297 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 KSR1Q8IVT5 923 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 CMTR2Q8IYT2 770 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 ERMNQ8TAM6 284 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 TCP11Q8WWU5 503 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 PSPC1Q8WXF1 523 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 RWDD3Q9Y3V2 267 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 COL4A3BPQ9Y5P4 624 aa24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 COL4A4P53420 1690 aaPredicted RBP24.42■■□□□ 1.5
PPFIA3-208ENST00000602726 SFPQP23246 707 aaKnown RBP eCLIP24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 TOB1P50616 345 aaPredicted RBP24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 GPM6BQ13491 265 aa24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 PAN2Q504Q3 1202 aaKnown RBP24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 PRPF31Q8WWY3 499 aaKnown RBP24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 MTRQ99707 1265 aa24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 ATP6V0A4Q9HBG4 840 aa24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 TUFT1Q9NNX1 390 aa24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 PRDM6Q9NQX0 595 aa24.41■■□□□ 1.5
PPFIA3-208ENST00000602726 H3BNC9 293 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 BMPR1AP36894 532 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 FAM189BP81408 668 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 SKIV2LQ15477 1246 aaKnown RBP24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 CATSPER3Q86XQ3 398 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 C4orf32Q8N8J7 132 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 PIGOQ8TEQ8 1089 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 CLP1Q92989 425 aaKnown RBP24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 TMEM161AQ9NX61 479 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 PCDHB6Q9Y5E3 794 aa24.4■■□□□ 1.5
PPFIA3-208ENST00000602726 NLRC5Q86WI3 1866 aa24.39■■□□□ 1.5
PPFIA3-208ENST00000602726 RB1P06400 928 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 SRGAP2CP0DJJ0 459 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 SPATA31C1P0DKV0 1188 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 XRCC6P12956 609 aaKnown RBP eCLIP24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 GATMP50440 423 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 LAMTOR4Q0VGL1 99 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 PTGDRQ13258 359 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 PTPROQ16827 1216 aa24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 LARP1BQ659C4 914 aaKnown RBP24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 POLR3CQ9BUI4 534 aaPredicted RBP24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 ELAC1Q9H777 363 aaKnown RBP24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 MRPL42Q9Y6G3 142 aaKnown RBP24.39■■□□□ 1.49
PPFIA3-208ENST00000602726 A0A087WWV3 80 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 ASAP2O43150 1006 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 MED24O75448 989 aa24.38■■□□□ 1.49
PPFIA3-208ENST00000602726 DGAT1O75907 488 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms