RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 CEP170P1Q96L14 293 aa19.23■□□□□ 0.67
HERC3-214ENST00000601319 SH2D3AQ9BRG2 576 aa19.23■□□□□ 0.67
HERC3-214ENST00000601319 RGS18Q9NS28 235 aa19.23■□□□□ 0.67
HERC3-214ENST00000601319 MGEA5O60502 916 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 LPXNO60711 386 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 ATP2B1P20020 1258 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 IGFBP4P22692 258 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 SARSP49591 514 aaKnown RBP19.22■□□□□ 0.67
HERC3-214ENST00000601319 NPEPPSP55786 919 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 GRB10Q13322 594 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 CTTNQ14247 550 aaKnown RBP19.22■□□□□ 0.67
HERC3-214ENST00000601319 DSC3Q14574 896 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 LMCD1Q9NZU5 365 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.22■□□□□ 0.67
HERC3-214ENST00000601319 MTCH2Q9Y6C9 303 aa19.22■□□□□ 0.67
HERC3-214ENST00000601319 DENND3A2RUS2 1198 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 POTEMA6NI47 508 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 RFXAPO00287 272 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 GTPBP6O43824 516 aaPredicted RBP19.21■□□□□ 0.67
HERC3-214ENST00000601319 LINC00271P0C7V0 271 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 GJB2P29033 226 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 POLGP54098 1239 aaPredicted RBP19.21■□□□□ 0.67
HERC3-214ENST00000601319 SLC24A5Q71RS6 500 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.21■□□□□ 0.67
HERC3-214ENST00000601319 NLRP7Q8WX94 980 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 SCLT1Q96NL6 688 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 ADAM2Q99965 735 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 C17orf80Q9BSJ5 609 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 TUFT1Q9NNX1 390 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 ANKEF1Q9NU02 776 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 SUCLA2Q9P2R7 463 aaPredicted RBP19.21■□□□□ 0.67
HERC3-214ENST00000601319 RWDD3Q9Y3V2 267 aa19.21■□□□□ 0.67
HERC3-214ENST00000601319 C9IYK1 514 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 TOB1P50616 345 aaPredicted RBP19.2■□□□□ 0.66
HERC3-214ENST00000601319 CUL4AQ13619 759 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 EMC2Q15006 297 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 ZNF174Q15697 407 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 EPC2Q52LR7 807 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 TPH2Q8IWU9 490 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 CMTR2Q8IYT2 770 aaKnown RBP19.2■□□□□ 0.66
HERC3-214ENST00000601319 FIBCD1Q8N539 461 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 C4orf32Q8N8J7 132 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 ZNF579Q8NAF0 562 aaKnown RBP19.2■□□□□ 0.66
HERC3-214ENST00000601319 FBXO22Q8NEZ5 403 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 GDPD5Q8WTR4 605 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 CLP1Q92989 425 aaKnown RBP19.2■□□□□ 0.66
HERC3-214ENST00000601319 GCOM2Q9BZD3 368 aaPredicted RBP19.2■□□□□ 0.66
HERC3-214ENST00000601319 MTUS1Q9ULD2 1270 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 SMC3Q9UQE7 1217 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 PLXNA4Q9HCM2 1894 aa19.2■□□□□ 0.66
HERC3-214ENST00000601319 XIRP2A4UGR9 3374 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 C5orf67F2Z3F1 127 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 XRCC6P12956 609 aaKnown RBP eCLIP19.19■□□□□ 0.66
HERC3-214ENST00000601319 FXR2P51116 673 aaKnown RBP eCLIP19.19■□□□□ 0.66
HERC3-214ENST00000601319 XKR9Q5GH70 373 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 RHPN2Q8IUC4 686 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 TCP11Q8WWU5 503 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 PSPC1Q8WXF1 523 aaKnown RBP19.19■□□□□ 0.66
HERC3-214ENST00000601319 ELAC1Q9H777 363 aaKnown RBP19.19■□□□□ 0.66
HERC3-214ENST00000601319 COL4A3BPQ9Y5P4 624 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 CUL9Q8IWT3 2517 aa19.19■□□□□ 0.66
HERC3-214ENST00000601319 MYH15Q9Y2K3 1946 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 A0A087WZ62 844 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 LAD1O00515 517 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 SPATA31C1P0DKV0 1188 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 SFPQP23246 707 aaKnown RBP eCLIP19.18■□□□□ 0.66
HERC3-214ENST00000601319 FAM189BP81408 668 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 BTG3Q14201 252 aaPredicted RBP19.18■□□□□ 0.66
HERC3-214ENST00000601319 RILPL1Q5EBL4 403 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 TMEM192Q8IY95 271 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 ERMNQ8TAM6 284 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 FDXACB1Q9BRP7 624 aaPredicted RBP19.18■□□□□ 0.66
HERC3-214ENST00000601319 POLR3CQ9BUI4 534 aaPredicted RBP19.18■□□□□ 0.66
HERC3-214ENST00000601319 INO80BQ9C086 356 aaPredicted RBP19.18■□□□□ 0.66
HERC3-214ENST00000601319 TMEM161AQ9NX61 479 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 LRFN2Q9ULH4 789 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 GTF3C3Q9Y5Q9 886 aa19.18■□□□□ 0.66
HERC3-214ENST00000601319 H3BNC9 293 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 H3BQV1 296 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 ZBTB39O15060 712 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 DGAT1O75907 488 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 RB1P06400 928 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 MUTP22033 750 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 RPA1P27694 616 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 PRPHP41219 470 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 TECP42680 631 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 RARRES1P49788 294 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 NBR1Q14596 966 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 HAUS3Q68CZ6 603 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 CATSPER3Q86XQ3 398 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 ZNF668Q96K58 619 aaPredicted RBP19.17■□□□□ 0.66
HERC3-214ENST00000601319 MTRQ99707 1265 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 TRAIPQ9BWF2 469 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 XPNPEP1Q9NQW7 623 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 CHST12Q9NRB3 414 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 PCDHB7Q9Y5E2 793 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 PCDHB6Q9Y5E3 794 aa19.17■□□□□ 0.66
HERC3-214ENST00000601319 ASAP2O43150 1006 aa19.16■□□□□ 0.66
HERC3-214ENST00000601319 ZSCAN20P17040 1043 aaPredicted RBP19.16■□□□□ 0.66
HERC3-214ENST00000601319 CTNNB1P35222 781 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms