RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 METAP2P50579 478 aaKnown RBP eCLIP20.18■□□□□ 0.827e-7■■■□□ 17.5
SSBP4-207ENST00000600244 CRYBB1P53674 252 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-207ENST00000600244 BCAR1P56945 870 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
SSBP4-207ENST00000600244 SEC23AQ15436 765 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 IFIT1BQ5T764 474 aaKnown RBP20.18■□□□□ 0.82
SSBP4-207ENST00000600244 PPFIBP1Q86W92 1011 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 ABI1Q8IZP0 508 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 TMEM87AQ8NBN3 555 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 PCDHGA2Q9Y5H1 932 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 UBIAD1Q9Y5Z9 338 aa20.18■□□□□ 0.82
SSBP4-207ENST00000600244 PIK3CDO00329 1044 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 LRRN2O75325 713 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 ALDH7A1P49419 539 aaKnown RBP20.17■□□□□ 0.82
SSBP4-207ENST00000600244 PPM1JQ5JR12 505 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 TMEM173Q86WV6 379 aaPredicted RBP20.17■□□□□ 0.82
SSBP4-207ENST00000600244 ECHDC2Q86YB7 292 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 ZBTB44Q8NCP5 570 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 SECISBP2LQ93073 1101 aaKnown RBP20.17■□□□□ 0.82
SSBP4-207ENST00000600244 TMEM169Q96HH4 297 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 FOXQ1Q9C009 403 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 EPC1Q9H2F5 836 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 PARD6AQ9NPB6 346 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 PKD2L1Q9P0L9 805 aa20.17■□□□□ 0.82
SSBP4-207ENST00000600244 STAT5BP51692 787 aa20.16■□□□□ 0.82
SSBP4-207ENST00000600244 STARD6P59095 220 aa20.16■□□□□ 0.82
SSBP4-207ENST00000600244 COL9A3Q14050 684 aaPredicted RBP20.16■□□□□ 0.82
SSBP4-207ENST00000600244 ERICH6BQ5W0A0 696 aa20.16■□□□□ 0.82
SSBP4-207ENST00000600244 DCLRE1AQ6PJP8 1040 aa20.16■□□□□ 0.82
SSBP4-207ENST00000600244 DDX53Q86TM3 631 aaKnown RBP20.16■□□□□ 0.82
SSBP4-207ENST00000600244 SMARCC2Q8TAQ2 1214 aa20.16■□□□□ 0.82
SSBP4-207ENST00000600244 NELL1Q92832 810 aa20.16■□□□□ 0.82
SSBP4-207ENST00000600244 SMG5Q9UPR3 1016 aaKnown RBP20.16■□□□□ 0.82
SSBP4-207ENST00000600244 MAFGO15525 162 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 LILRB5O75023 590 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 IGHDP01880 384 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 HOXB3P14651 431 aaPredicted RBP20.15■□□□□ 0.82
SSBP4-207ENST00000600244 MTMR1Q13613 665 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 GRM4Q14833 912 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 WTAPQ15007 396 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 ACAP1Q15027 740 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 KIZQ2M2Z5 673 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 ZNF598Q86UK7 904 aaKnown RBP20.15■□□□□ 0.82
SSBP4-207ENST00000600244 CMASQ8NFW8 434 aaPredicted RBP20.15■□□□□ 0.82
SSBP4-207ENST00000600244 ATRIPQ8WXE1 791 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 MYADMQ96S97 322 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 OSMRQ99650 979 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 UBAC1Q9BSL1 405 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 JPH1Q9HDC5 661 aaPredicted RBP20.15■□□□□ 0.82
SSBP4-207ENST00000600244 WDR6Q9NNW5 1121 aaKnown RBP20.15■□□□□ 0.82
SSBP4-207ENST00000600244 SLC2A4RGQ9NR83 387 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 SLC9A2Q9UBY0 812 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 USP18Q9UMW8 372 aa20.15■□□□□ 0.82
SSBP4-207ENST00000600244 GPR32O75388 356 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 GBP2P32456 591 aaPredicted RBP20.14■□□□□ 0.81
SSBP4-207ENST00000600244 CLCN4P51793 760 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 PTPN14Q15678 1187 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 CUL5Q93034 780 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 KLHL5Q96PQ7 755 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 RHOBTB2Q9BYZ6 727 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 JADE2Q9NQC1 790 aa20.14■□□□□ 0.81
SSBP4-207ENST00000600244 SLC30A4O14863 429 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 LAMTOR5O43504 91 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 SLC26A2P50443 739 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 ACTR2P61160 394 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 SMC5Q8IY18 1101 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 HELQQ8TDG4 1101 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 BCL7CQ8WUZ0 217 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-207ENST00000600244 IGSF21Q96ID5 467 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 RWDD1Q9H446 243 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-207ENST00000600244 SH2B1Q9NRF2 756 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-207ENST00000600244 DOCK8Q8NF50 2099 aa20.13■□□□□ 0.81
SSBP4-207ENST00000600244 ANKRD11Q6UB99 2663 aaPredicted RBP20.13■□□□□ 0.81
SSBP4-207ENST00000600244 EVPLQ92817 2033 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 LAMA4Q16363 1823 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 ZBTB42B2RXF5 422 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 TBC1D4O60343 1298 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 HBP1O60381 514 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 ATG7O95352 703 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 CSTF1Q05048 431 aaKnown RBP20.12■□□□□ 0.81
SSBP4-207ENST00000600244 CYP26C1Q6V0L0 522 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 PPP1R16BQ96T49 567 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 VN1R3Q9BXE9 311 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 MRPL9Q9BYD2 267 aaKnown RBP20.12■□□□□ 0.81
SSBP4-207ENST00000600244 KRT23Q9C075 422 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 SPATA6Q9NWH7 488 aaPredicted RBP20.12■□□□□ 0.81
SSBP4-207ENST00000600244 ZSCAN32Q9NX65 697 aa20.12■□□□□ 0.81
SSBP4-207ENST00000600244 IGKV6D-21A0A0A0MT36 114 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 A0A0U1RQF3 1178 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 SPDYE4A6NLX3 237 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 ANHXE9PGG2 379 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 LILRB3O75022 631 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 CNPP09543 421 aaKnown RBP20.11■□□□□ 0.81
SSBP4-207ENST00000600244 ZSCAN20P17040 1043 aaPredicted RBP20.11■□□□□ 0.81
SSBP4-207ENST00000600244 RNF169Q8NCN4 708 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 STAMQ92783 540 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 SHDQ96IW2 340 aa20.11■□□□□ 0.81
SSBP4-207ENST00000600244 DDX23Q9BUQ8 820 aaKnown RBP20.11■□□□□ 0.81
SSBP4-207ENST00000600244 COL1A2P08123 1366 aa20.1■□□□□ 0.81
SSBP4-207ENST00000600244 CLUHO75153 1309 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms