RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 SFNP31947 248 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 PEX3P56589 373 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 SP2Q02086 613 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 XRRA1Q6P2D8 792 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 IRF2BP2Q7Z5L9 587 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 DNAAF5Q86Y56 855 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 GOLGA1Q92805 767 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 CBWD1Q9BRT8 395 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 KIFC3Q9BVG8 833 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 TCEAL9Q9UHQ7 104 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 PCDHA10Q9Y5I2 948 aa15.83■□□□□ 0.13
VRK3-217ENST00000599538 DLG4P78352 724 aa15.83■□□□□ 0.12
VRK3-217ENST00000599538 KLHL30Q0D2K2 578 aa15.83■□□□□ 0.12
VRK3-217ENST00000599538 PAPD7Q5XG87 772 aaKnown RBP15.83■□□□□ 0.12
VRK3-217ENST00000599538 ZNF746Q6NUN9 644 aaPredicted RBP15.83■□□□□ 0.12
VRK3-217ENST00000599538 GBP6Q6ZN66 633 aa15.83■□□□□ 0.12
VRK3-217ENST00000599538 STXBP4Q6ZWJ1 553 aa15.83■□□□□ 0.12
VRK3-217ENST00000599538 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
VRK3-217ENST00000599538 DRC1Q96MC2 740 aa15.83■□□□□ 0.12
VRK3-217ENST00000599538 CCDC43Q96MW1 224 aaKnown RBP15.83■□□□□ 0.12
VRK3-217ENST00000599538 NUCKS1Q9H1E3 243 aaKnown RBP15.83■□□□□ 0.12
VRK3-217ENST00000599538 ADAMTS1Q9UHI8 967 aa15.83■□□□□ 0.12
VRK3-217ENST00000599538 RBAK-RBAKDNI3L0D1 243 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 IRF6O14896 467 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 ZNF185O15231 689 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 EXOC3O60645 756 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 FMO5P49326 533 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 PTK2Q05397 1052 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 ASIC2Q16515 512 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 FAM102BQ5T8I3 360 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 SWSAP1Q6NVH7 229 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 HAUS6Q7Z4H7 955 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 CCDC60Q8IWA6 550 aaPredicted RBP15.82■□□□□ 0.12
VRK3-217ENST00000599538 SULF1Q8IWU6 871 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 CEP112Q8N8E3 955 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 DCPSQ96C86 337 aaKnown RBP15.82■□□□□ 0.12
VRK3-217ENST00000599538 MKNK1Q9BUB5 465 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 PACSIN1Q9BY11 444 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 PARD6BQ9BYG5 372 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 ELP3Q9H9T3 547 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 PAPPA2Q9BXP8 1791 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 LRRN2O75325 713 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 CBX1P83916 185 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 IQCEQ6IPM2 695 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 LBX2Q6XYB7 198 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 ZNF571Q7Z3V5 609 aaPredicted RBP15.82■□□□□ 0.12
VRK3-217ENST00000599538 GPR161Q8N6U8 529 aaKnown RBP15.82■□□□□ 0.12
VRK3-217ENST00000599538 NOA1Q8NC60 698 aaKnown RBP15.82■□□□□ 0.12
VRK3-217ENST00000599538 BSNDQ8WZ55 320 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 RABGGTAQ92696 567 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 SPAG5Q96R06 1193 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 SENP7Q9BQF6 1050 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.82■□□□□ 0.12
VRK3-217ENST00000599538 FRMD4BQ9Y2L6 1034 aa15.82■□□□□ 0.12
VRK3-217ENST00000599538 PJA2O43164 708 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 BUB1O43683 1085 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 SEC31AO94979 1220 aaKnown RBP15.81■□□□□ 0.12
VRK3-217ENST00000599538 WHAMMP3Q1A5X7 153 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 GADL1Q6ZQY3 521 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 SLC9A9Q8IVB4 645 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 EHBP1Q8NDI1 1231 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 OTUD5Q96G74 571 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 CAPZA3Q96KX2 299 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 MMS19Q96T76 1030 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 TSGA10Q9BZW7 698 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 ANKZF1Q9H8Y5 726 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 JPH1Q9HDC5 661 aaPredicted RBP15.81■□□□□ 0.12
VRK3-217ENST00000599538 ANKEF1Q9NU02 776 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 DDX41Q9UJV9 622 aaKnown RBP15.81■□□□□ 0.12
VRK3-217ENST00000599538 SAR1BQ9Y6B6 198 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 MYPNQ86TC9 1320 aa15.81■□□□□ 0.12
VRK3-217ENST00000599538 SPATA31C2B4DYI2 1134 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 MAFGO15525 162 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 JAM2P57087 298 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 ACTR2P61160 394 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 GTF2BQ00403 316 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 BFSP1Q12934 665 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 TUBB2AQ13885 445 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 SLC18A3Q16572 532 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 PLEKHO2Q8TD55 490 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 CEP170P1Q96L14 293 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 SYT17Q9BSW7 474 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 TUBB2BQ9BVA1 445 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 SLC9A2Q9UBY0 812 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 CSADQ9Y600 493 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 PFASO15067 1338 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 GTPBP10A4D1E9 387 aaKnown RBP15.8■□□□□ 0.12
VRK3-217ENST00000599538 PPP1R12BO60237 982 aaPredicted RBP15.8■□□□□ 0.12
VRK3-217ENST00000599538 MAPTP10636 758 aaKnown RBP15.8■□□□□ 0.12
VRK3-217ENST00000599538 NCKAP1LP55160 1127 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 C9orf131Q5VYM1 1079 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 ANKRD35Q8N283 1001 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 ACCSQ96QU6 501 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 LOC285556D6RIA3 1793 aa15.8■□□□□ 0.12
VRK3-217ENST00000599538 CCDC169A6NNP5 214 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 ANKRD63C9JTQ0 380 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 PDE2AO00408 941 aaPredicted RBP15.79■□□□□ 0.12
VRK3-217ENST00000599538 KLRC1P26715 233 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 NPTX2P47972 431 aa15.79■□□□□ 0.12
VRK3-217ENST00000599538 ABHD15Q6UXT9 468 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms