RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 PLXNC1O60486 1568 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 SHANK2Q9UPX8 1470 aa12.64□□□□□ -0.39
SCN8A-208ENST00000599343 PNMA6FA0A0J9YX94 578 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 CC2D1AQ6P1N0 951 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 TGS1Q96RS0 853 aaKnown RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 EPC1Q9H2F5 836 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 CEP72Q9P209 647 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 ZBTB1Q9Y2K1 713 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 SYNGAP1Q96PV0 1343 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 RNF103-CHMP3A0A140T963 221 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 KPNA7A9QM74 516 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 KRT38O76015 456 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 ABCD1P33897 745 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 PPARGP37231 505 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 PPM1NQ8N819 430 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 IFT43Q96FT9 208 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 PZPP20742 1482 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 GCLMP48507 274 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 BLVRAP53004 296 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 MECOMQ03112 1051 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 CCDC85BQ15834 202 aaPredicted RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 ANO4Q32M45 955 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 ZNF667Q5HYK9 610 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 SLC8A2Q9UPR5 921 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 CHGBP05060 677 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 LBRQ14739 615 aaKnown RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 MORF4L2Q15014 288 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 CATSPER3Q86XQ3 398 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 RBM41Q96IZ5 413 aaKnown RBP12.63□□□□□ -0.39
SCN8A-208ENST00000599343 POTEMA6NI47 508 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 RAD17O75943 681 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 BAG6P46379 1132 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 SFR1Q86XK3 245 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 OSBPL1AQ9BXW6 950 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 SLC13A1Q9BZW2 595 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 HDAC6Q9UBN7 1215 aa12.63□□□□□ -0.39
SCN8A-208ENST00000599343 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCN8A-208ENST00000599343 CDK8P49336 464 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 PPP2R2AP63151 447 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 KCNQ4P56696 695 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 GPC5P78333 572 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 EFTUD2Q15029 972 aaKnown RBP eCLIP12.62□□□□□ -0.39
SCN8A-208ENST00000599343 CC2D2BQ6DHV5 1058 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 SAAL1Q96ER3 474 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 C11orf70Q9BRQ4 267 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 NUP85Q9BW27 656 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 PCSK1NQ9UHG2 260 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 SSTR3P32745 418 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-208ENST00000599343 FBXW4P57775 412 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 MXD4Q14582 209 aaPredicted RBP12.62□□□□□ -0.39
SCN8A-208ENST00000599343 TMEM270Q6UE05 265 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 NLRP14Q86W24 1093 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 AGR3Q8TD06 166 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 GOLPH3LQ9H4A5 285 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 GMNCA6NCL1 334 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 PRR29P0C7W0 189 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 RAP1GDS1P52306 607 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 AP2B1P63010 937 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 ALCAMQ13740 583 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 KLHL38Q2WGJ6 581 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 NAF1Q96HR8 494 aaKnown RBP12.62□□□□□ -0.39
SCN8A-208ENST00000599343 STX18Q9P2W9 335 aaKnown RBP12.62□□□□□ -0.39
SCN8A-208ENST00000599343 POLIQ9UNA4 740 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 ATP5HO75947 161 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 ELF1P32519 619 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 IFNA8P32881 189 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 SLFN12LQ6IEE8 588 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 UNC13DQ70J99 1090 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 LZICQ8WZA0 190 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 GCNAQ96QF7 691 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 NEUROG2Q9H2A3 272 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 SLAIN2Q9P270 581 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 TRIM33Q9UPN9 1127 aa12.62□□□□□ -0.39
SCN8A-208ENST00000599343 ERBB4Q15303 1308 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ARFIP2P53365 341 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ARL8AQ96BM9 186 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 STOML1Q9UBI4 398 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 LGALS16A8MUM7 142 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 CHUKO15111 745 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 NR3C1P04150 777 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 PYGLP06737 847 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ERFP50548 548 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 RBBP7Q16576 425 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ZNF746Q6NUN9 644 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 PLEKHF1Q96S99 279 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 DDX47Q9H0S4 455 aaKnown RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ASNSD1Q9NWL6 643 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 MYL3P08590 195 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 RAD23BP54727 409 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 ZNF564Q8TBZ8 553 aaPredicted RBP12.61□□□□□ -0.39
SCN8A-208ENST00000599343 SLITRK6Q9H5Y7 841 aa12.61□□□□□ -0.39
SCN8A-208ENST00000599343 UBE4BO95155 1302 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms