RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 GPR32O75388 356 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 OR52Z1P0C646 297 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 SFPQP23246 707 aaKnown RBP eCLIP15.8■□□□□ 0.12
LIG1-218ENST00000599322 SARSP49591 514 aaKnown RBP15.8■□□□□ 0.12
LIG1-218ENST00000599322 GPC3P51654 580 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 MRPS5P82675 430 aaKnown RBP15.8■□□□□ 0.12
LIG1-218ENST00000599322 CTTNQ14247 550 aaKnown RBP15.8■□□□□ 0.12
LIG1-218ENST00000599322 ZNF174Q15697 407 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 ANO5Q75V66 913 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 ZNF410Q86VK4 478 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 RHPN2Q8IUC4 686 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 SP7Q8TDD2 431 aaPredicted RBP15.8■□□□□ 0.12
LIG1-218ENST00000599322 ADAMTS19Q8TE59 1207 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 ADAM2Q99965 735 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 CDHR5Q9HBB8 845 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 ATP6V0A4Q9HBG4 840 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 DACT1Q9NYF0 836 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 RGL1Q9NZL6 768 aa15.8■□□□□ 0.12
LIG1-218ENST00000599322 ADGRA3Q8IWK6 1321 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 ASAP2O43150 1006 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 HOXA2O43364 376 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 RB1P06400 928 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 POU3F3P20264 500 aaPredicted RBP15.79■□□□□ 0.12
LIG1-218ENST00000599322 GJB2P29033 226 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 NCBP1Q09161 790 aaKnown RBP15.79■□□□□ 0.12
LIG1-218ENST00000599322 GRB10Q13322 594 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 SPOUT1Q5T280 376 aaKnown RBP15.79■□□□□ 0.12
LIG1-218ENST00000599322 PLA2G4FQ68DD2 849 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 TMEM192Q8IY95 271 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 PSPC1Q8WXF1 523 aaKnown RBP15.79■□□□□ 0.12
LIG1-218ENST00000599322 SH2D3AQ9BRG2 576 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 RGS18Q9NS28 235 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 ANKEF1Q9NU02 776 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 MTCH2Q9Y6C9 303 aa15.79■□□□□ 0.12
LIG1-218ENST00000599322 IGKV6-21A0A0C4DH24 114 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 DGKIO75912 1065 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 SLITRK3O94933 977 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 XRCC6P12956 609 aaKnown RBP eCLIP15.78■□□□□ 0.12
LIG1-218ENST00000599322 DARSP14868 501 aaKnown RBP15.78■□□□□ 0.12
LIG1-218ENST00000599322 CTNNB1P35222 781 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 TECP42680 631 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 NPEPPSP55786 919 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 GPM6BQ13491 265 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 AAK1Q2M2I8 961 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 EPC2Q52LR7 807 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 HAUS3Q68CZ6 603 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 SPRED2Q7Z698 418 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 FAM228AQ86W67 206 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 CMTR2Q8IYT2 770 aaKnown RBP15.78■□□□□ 0.12
LIG1-218ENST00000599322 ABI1Q8IZP0 508 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 LINC01465Q8N7H1 131 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 NLRP4Q96MN2 994 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 MTMR9Q96QG7 549 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 MTRQ99707 1265 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 C17orf80Q9BSJ5 609 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 C11orf84Q9BUA3 381 aaPredicted RBP15.78■□□□□ 0.12
LIG1-218ENST00000599322 ADAMTS10Q9H324 1103 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 TUFT1Q9NNX1 390 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 AAASQ9NRG9 546 aa15.78■□□□□ 0.12
LIG1-218ENST00000599322 EVPLQ92817 2033 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 TMEM150BA6NC51 233 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 LAD1O00515 517 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 STBD1O95210 358 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 LYPLA2O95372 231 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 SKIP12755 728 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 PDCP20941 246 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 U2AF2P26368 475 aaKnown RBP eCLIP15.77■□□□□ 0.12
LIG1-218ENST00000599322 TFF2Q03403 129 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 SPIRE1Q08AE8 756 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 TFDP1Q14186 410 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 MXD4Q14582 209 aaPredicted RBP15.77■□□□□ 0.12
LIG1-218ENST00000599322 RILPL1Q5EBL4 403 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 LARP1BQ659C4 914 aaKnown RBP15.77■□□□□ 0.12
LIG1-218ENST00000599322 CATSPER4Q7RTX7 472 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 RTN4RL1Q86UN2 441 aaPredicted RBP15.77■□□□□ 0.12
LIG1-218ENST00000599322 TMEM40Q8WWA1 233 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 ZNF668Q96K58 619 aaPredicted RBP15.77■□□□□ 0.12
LIG1-218ENST00000599322 NACC1Q96RE7 527 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 HSD17B14Q9BPX1 270 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 BACH2Q9BYV9 841 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 TMX1Q9H3N1 280 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 ELAC1Q9H777 363 aaKnown RBP15.77■□□□□ 0.12
LIG1-218ENST00000599322 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 COL4A3BPQ9Y5P4 624 aa15.77■□□□□ 0.12
LIG1-218ENST00000599322 NLRC5Q86WI3 1866 aa15.77■□□□□ 0.11
LIG1-218ENST00000599322 A0A087WZ62 844 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 DGAT1O75907 488 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 BMP1P13497 986 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 BMPR1AP36894 532 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 EMC2Q15006 297 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 GDPD5Q8WTR4 605 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 NECAB3Q96P71 396 aaPredicted RBP15.76■□□□□ 0.11
LIG1-218ENST00000599322 UHRF1Q96T88 793 aaPredicted RBP15.76■□□□□ 0.11
LIG1-218ENST00000599322 FDXACB1Q9BRP7 624 aaPredicted RBP15.76■□□□□ 0.11
LIG1-218ENST00000599322 PLVAPQ9BX97 442 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 TMEM60Q9H2L4 133 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 DHX33Q9H6R0 707 aaKnown RBP15.76■□□□□ 0.11
LIG1-218ENST00000599322 TMEM161AQ9NX61 479 aa15.76■□□□□ 0.11
LIG1-218ENST00000599322 BDP1A6H8Y1 2624 aa15.75■□□□□ 0.11
LIG1-218ENST00000599322 POTEMA6NI47 508 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms