RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 EPB41L2O43491 1005 aaKnown RBP14.15□□□□□ -0.14
TRIM28-212ENST00000597995 EIF4BP23588 611 aaKnown RBP14.15□□□□□ -0.14
TRIM28-212ENST00000597995 GNA11P29992 359 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.141e-7■□□□□ 9.9
TRIM28-212ENST00000597995 NLRP11P59045 1033 aaKnown RBP14.15□□□□□ -0.14
TRIM28-212ENST00000597995 RBM10P98175 930 aaKnown RBP14.15□□□□□ -0.14
TRIM28-212ENST00000597995 KRT17Q04695 432 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 IER5LQ5T953 404 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 ERICH6BQ5W0A0 696 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 EFCAB12Q6NXP0 572 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 SYCE2Q6PIF2 218 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 KCNT2Q6UVM3 1135 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 LRRC55Q6ZSA7 311 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 ABI1Q8IZP0 508 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 LRRC43Q8N309 656 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 PRSS33Q8NF86 280 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 ZNF558Q96NG5 402 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 PPP1R16BQ96T49 567 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 TCF25Q9BQ70 676 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 NRBP2Q9NSY0 501 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 GABBR1Q9UBS5 961 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 NAP1L2Q9ULW6 460 aaPredicted RBP14.15□□□□□ -0.14
TRIM28-212ENST00000597995 ZDBF2Q9HCK1 2354 aa14.15□□□□□ -0.14
TRIM28-212ENST00000597995 WDR64B1ANS9 1081 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 PRPF3O43395 683 aaKnown RBP14.14□□□□□ -0.15
TRIM28-212ENST00000597995 EOMESO95936 686 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 TECP42680 631 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 CLCN3P51790 818 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 EVCP57679 992 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 FGD1P98174 961 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 TOB2Q14106 344 aaPredicted RBP14.14□□□□□ -0.15
TRIM28-212ENST00000597995 NTRK3Q16288 839 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 PRR16Q569H4 304 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 PLPP4Q5VZY2 271 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 ECHDC2Q86YB7 292 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 BICD2Q8TD16 824 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 ASIC4Q96FT7 647 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 SPG21Q9NZD8 308 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 AKT3Q9Y243 479 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 SAMM50Q9Y512 469 aa14.14□□□□□ -0.15
TRIM28-212ENST00000597995 A0A0U1RQF3 1178 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 PSMA5P28066 241 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 PDIA3P30101 505 aaKnown RBP14.13□□□□□ -0.15
TRIM28-212ENST00000597995 PTPN21Q16825 1174 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 RUFY3Q7L099 469 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 TRMT1LQ7Z2T5 733 aaKnown RBP14.13□□□□□ -0.15
TRIM28-212ENST00000597995 TMC7Q7Z402 723 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 MRPL43Q8N983 215 aaKnown RBP14.13□□□□□ -0.15
TRIM28-212ENST00000597995 RSPH1Q8WYR4 309 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 CASP10Q92851 521 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 LENG9Q96B70 501 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 RIT2Q99578 217 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 DISC1Q9NRI5 854 aa14.13□□□□□ -0.15
TRIM28-212ENST00000597995 HIDE1A8MVS5 230 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 ZNF862O60290 1169 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 OATP04181 439 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 DARSP14868 501 aaKnown RBP14.12□□□□□ -0.15
TRIM28-212ENST00000597995 SFNP31947 248 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 GPC3P51654 580 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 USP11P51784 963 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 CDC42EP1Q00587 391 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 TCF15Q12870 199 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 SMC1AQ14683 1233 aaKnown RBP14.12□□□□□ -0.15
TRIM28-212ENST00000597995 TPRNQ4KMQ1 711 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 ZNF598Q86UK7 904 aaKnown RBP14.12□□□□□ -0.15
TRIM28-212ENST00000597995 SLC39A11Q8N1S5 342 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 LRRC71Q8N4P6 559 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 PHKBQ93100 1093 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
TRIM28-212ENST00000597995 IRF2BPLQ9H1B7 796 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 NCOA5Q9HCD5 579 aaKnown RBP14.12□□□□□ -0.15
TRIM28-212ENST00000597995 DACT1Q9NYF0 836 aa14.12□□□□□ -0.15
TRIM28-212ENST00000597995 WDR81Q562E7 1941 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 CARNS1A5YM72 827 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 AVPR2P30518 371 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 NUBP1P53384 320 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 CCT2P78371 535 aaKnown RBP14.11□□□□□ -0.15
TRIM28-212ENST00000597995 AKAP17AQ02040 695 aaKnown RBP14.11□□□□□ -0.15
TRIM28-212ENST00000597995 PRKCEQ02156 737 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 ITIH3Q06033 890 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 BMS1Q14692 1282 aaKnown RBP14.11□□□□□ -0.15
TRIM28-212ENST00000597995 CLLU1OSQ5K130 101 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 LLGL2Q6P1M3 1020 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 CCDC148Q8NFR7 591 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 NECTIN4Q96NY8 510 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 PHOX2BQ99453 314 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 RNF26Q9BY78 433 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-212ENST00000597995 MRPL9Q9BYD2 267 aaKnown RBP14.11□□□□□ -0.15
TRIM28-212ENST00000597995 TM6SF1Q9BZW5 370 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 ADAM7Q9H2U9 754 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 CHST12Q9NRB3 414 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 NR2E1Q9Y466 385 aa14.11□□□□□ -0.15
TRIM28-212ENST00000597995 C2orf71A6NGG8 1288 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 MSH4O15457 936 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 EDIL3O43854 480 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 PBX3P40426 434 aa14.1□□□□□ -0.15
TRIM28-212ENST00000597995 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms