RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 SYNE3Q6ZMZ3 975 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 TMC7Q7Z402 723 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 ECHDC2Q86YB7 292 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 MRPL43Q8N983 215 aaKnown RBP18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 ZNF668Q96K58 619 aaPredicted RBP18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 ZNF558Q96NG5 402 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 POMKQ9H5K3 350 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 SPG21Q9NZD8 308 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 HCFC2Q9Y5Z7 792 aa18.65■□□□□ 0.58
SHKBP1-215ENST00000597649 FAM186AA6NE01 2351 aa18.64■□□□□ 0.58
SHKBP1-215ENST00000597649 C2CD4DB7Z1M9 353 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 CLASP2O75122 1294 aaKnown RBP18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 BRD1O95696 1058 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 SRGAP2BP0DMP2 458 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 KANK3Q6NY19 840 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 ZBTB33Q86T24 672 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 SLC39A11Q8N1S5 342 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 ZNF577Q9BSK1 485 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 GABBR1Q9UBS5 961 aa18.64■□□□□ 0.57
SHKBP1-215ENST00000597649 DCHS1Q96JQ0 3298 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 ZBTB43O43298 467 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 WEE2P0C1S8 567 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 FGFR4P22455 802 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 EIF4BP23588 611 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 KRT17Q04695 432 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 ZNF746Q6NUN9 644 aaPredicted RBP18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 EFCAB12Q6NXP0 572 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 ZNF598Q86UK7 904 aaKnown RBP18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 LRRC71Q8N4P6 559 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 RNF169Q8NCN4 708 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 FEZF2Q8TBJ5 459 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 ADAM7Q9H2U9 754 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 AKT3Q9Y243 479 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 PCDHA10Q9Y5I2 948 aa18.63■□□□□ 0.57
SHKBP1-215ENST00000597649 NT5C1B-RDH14C9J2C7 533 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 hCG_1984214I3L0E3 225 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 MAGEB2O15479 319 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 HOXA2O43364 376 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 GALR2O43603 387 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 EDIL3O43854 480 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 ZNF862O60290 1169 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 ADD1P35611 737 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 PPM1AP35813 382 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 LRRC43Q8N309 656 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 C12orf76Q8N812 135 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 ZNF713Q8N859 430 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 TMEM105Q8N8V8 129 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 CASP10Q92851 521 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 IRF2BPLQ9H1B7 796 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 GLT8D2Q9H1C3 349 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 TBC1D22BQ9NU19 505 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 SORCS3Q9UPU3 1222 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 NR2E1Q9Y466 385 aa18.62■□□□□ 0.57
SHKBP1-215ENST00000597649 GVINP1Q7Z2Y8 2422 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 A0A0U1RQF3 1178 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 PROB1E7EW31 1015 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 CSDE1O75534 798 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 PSAPP07602 524 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 ZSCAN20P17040 1043 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 SMC1AQ14683 1233 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 ADCK5Q3MIX3 580 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 TPRNQ4KMQ1 711 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 DHX32Q7L7V1 743 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 ASCL5Q7RTU5 278 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 RASEFQ8IZ41 740 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 ABI1Q8IZP0 508 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 HELQQ8TDG4 1101 aa18.61■□□□□ 0.57
SHKBP1-215ENST00000597649 GOLGA8AA7E2F4 631 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 GOLGA8BA8MQT2 603 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 CXCL14O95715 111 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 ASGR2P07307 311 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 DARSP14868 501 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 GPC3P51654 580 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 NUBP1P53384 320 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 BCAR1P56945 870 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 ITIH3Q06033 890 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 PFKFB3Q16875 520 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 PRR16Q569H4 304 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 TMEM173Q86WV6 379 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 SMAP1Q8IYB5 467 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 UBALD2Q8IYN6 164 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 AUTS2Q8WXX7 1259 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 LENG9Q96B70 501 aa18.6■□□□□ 0.57
SHKBP1-215ENST00000597649 ZNF292O60281 2723 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 PLXNA3P51805 1871 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 KLF18A0A0U1RQI7 1052 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 METAP2P50579 478 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 DRP2Q13474 957 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 MTMR3Q13615 1198 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 UGCGQ16739 394 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 C8orf34Q49A92 452 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 RARS2Q5T160 578 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 RNF20Q5VTR2 975 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 CES5AQ6NT32 575 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 NECTIN4Q96NY8 510 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 MAP7D2Q96T17 732 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 ZMYND12Q9H0C1 365 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 LIMD1Q9UGP4 676 aa18.59■□□□□ 0.57
SHKBP1-215ENST00000597649 CEP131Q9UPN4 1083 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms