RNA–Protein interactions for RNA: ENST00000596825.5

ZNF544-208, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-208ENST00000596825 ZIM3Q96PE6 472 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 TEKT3Q9BXF9 490 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 NAGPAQ9UK23 515 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 E7EVH7 732 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 HNRNPDLO14979 420 aaKnown RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 SART1O43290 800 aaKnown RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 CD58P19256 250 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 HOXD13P35453 343 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 FLT3P36888 993 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 MARCKSL1P49006 195 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 MEA1Q16626 185 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 SWSAP1Q6NVH7 229 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 ZBTB33Q86T24 672 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 PRUNE1Q86TP1 453 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 IFT20Q8IY31 132 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 SLC35G2Q8TBE7 412 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 TBK1Q9UHD2 729 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 CACNA1SQ13698 1873 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 LRRIQ4A6NIV6 560 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 PIK3R2O00459 728 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 FTLP02792 175 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 USP11P51784 963 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 RPS6P62753 249 aaKnown RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 MTMR1Q13613 665 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 BAATQ14032 418 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 B4GALNT4Q76KP1 1039 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 TMEM143Q96AN5 459 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 ARHGEF26Q96DR7 871 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 MAGEF1Q9HAY2 307 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 COL20A1Q9P218 1284 aa13.55□□□□□ -0.24
ZNF544-208ENST00000596825 SEPT9Q9UHD8 586 aaPredicted RBP13.55□□□□□ -0.24
ZNF544-208ENST00000596825 C4AP0C0L4 1744 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 C4BP0C0L5 1744 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 OPLAHO14841 1288 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 SYF2O95926 243 aaKnown RBP13.54□□□□□ -0.24
ZNF544-208ENST00000596825 ITGB5P18084 799 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 NBPF12Q5TAG4 269 aaPredicted RBP13.54□□□□□ -0.24
ZNF544-208ENST00000596825 PAPD7Q5XG87 772 aaKnown RBP13.54□□□□□ -0.24
ZNF544-208ENST00000596825 MDM1Q8TC05 714 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 CASKIN2Q8WXE0 1202 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 ATG4CQ96DT6 458 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 CCDC114Q96M63 670 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 NYAP2Q9P242 653 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 PPP1R9AQ9ULJ8 1098 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 RRP15Q9Y3B9 282 aaKnown RBP13.54□□□□□ -0.24
ZNF544-208ENST00000596825 NID2Q14112 1375 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 ESYT2A0FGR8 921 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 IGBP1P78318 339 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 SLC27A3Q5K4L6 730 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 SPOPLQ6IQ16 392 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
ZNF544-208ENST00000596825 SLC35C1Q96A29 364 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 FAM213AQ9BRX8 229 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 PLAAQ9Y263 795 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 BRCA2P51587 3418 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 USP54Q70EL1 1684 aa13.54□□□□□ -0.24
ZNF544-208ENST00000596825 GSTTP1A0A1W2PQM5 241 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 MYO1CO00159 1063 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 PLCB3Q01970 1234 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 CXCL9Q07325 125 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 ORC1Q13415 861 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 OTOP1Q7RTM1 612 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 CCDC105Q8IYK2 499 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 MSANTD4Q8NCY6 345 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 DCAF4Q8WV16 495 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 CAPS2Q9BXY5 557 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 KCTD10Q9H3F6 313 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 FAM184BQ9ULE4 1060 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 CYP3A4P08684 503 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 RXRBP28702 533 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 SCARA5Q6ZMJ2 495 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 C1orf54Q8WWF1 131 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 AMFRQ9UKV5 643 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 NOVA2Q9UNW9 492 aaKnown RBP13.53□□□□□ -0.24
ZNF544-208ENST00000596825 MRPL11Q9Y3B7 192 aaKnown RBP13.53□□□□□ -0.24
ZNF544-208ENST00000596825 NOC2LQ9Y3T9 749 aaKnown RBP13.53□□□□□ -0.24
ZNF544-208ENST00000596825 RIPK3Q9Y572 518 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 DDX3XO00571 662 aaKnown RBP eCLIP13.53□□□□□ -0.242e-20■■■■□ 26.3
ZNF544-208ENST00000596825 TGFB1I1O43294 461 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 PRELPP51888 382 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 PSMD2Q13200 908 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 RPUSD2Q8IZ73 545 aaKnown RBP13.53□□□□□ -0.24
ZNF544-208ENST00000596825 FAM71BQ8TC56 605 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 CPA5Q8WXQ8 436 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 KCNMB3Q9NPA1 279 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 GABBR1Q9UBS5 961 aa13.53□□□□□ -0.24
ZNF544-208ENST00000596825 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 SPDYE6P0CI01 402 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 SNHG28P0DPA3 235 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 PSMC4P43686 418 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 TNNC1P63316 161 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 UGCGQ16739 394 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 TMEM130Q8N3G9 435 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 NACC1Q96RE7 527 aa13.52□□□□□ -0.24
ZNF544-208ENST00000596825 WRNIP1Q96S55 665 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms