RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 VPS13AQ96RL7 3174 aa17.4■□□□□ 0.38
FOXA3-202ENST00000594297 hCG_1642624A0A1W2PR95 340 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 STX6O43752 255 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 SYT1P21579 422 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 GNA11P29992 359 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 NBL1P41271 181 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 NAPAP54920 295 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 NLRP5P59047 1200 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 PLCB4Q15147 1175 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 FAM102BQ5T8I3 360 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 BICD2Q8TD16 824 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 SMOC2Q9H3U7 446 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 ERVK-5Q9HDB9 667 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 BARHL2Q9NY43 387 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 PCDHB7Q9Y5E2 793 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 UBIAD1Q9Y5Z9 338 aa17.39■□□□□ 0.37
FOXA3-202ENST00000594297 SPTBN4Q9H254 2564 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 BRD1O95696 1058 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 KRT76Q01546 638 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 NFX1Q12986 1120 aaKnown RBP17.38■□□□□ 0.37
FOXA3-202ENST00000594297 MTMR3Q13615 1198 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 UBE2SQ16763 222 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 TEX2Q8IWB9 1127 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 FBXO18Q8NFZ0 1043 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 RASGRP4Q8TDF6 673 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 CWH43Q9H720 699 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 JPH1Q9HDC5 661 aaPredicted RBP17.38■□□□□ 0.37
FOXA3-202ENST00000594297 ENTPD7Q9NQZ7 604 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 TYW1Q9NV66 732 aaKnown RBP17.38■□□□□ 0.37
FOXA3-202ENST00000594297 SORCS3Q9UPU3 1222 aa17.38■□□□□ 0.37
FOXA3-202ENST00000594297 NOC2LQ9Y3T9 749 aaKnown RBP17.38■□□□□ 0.37
FOXA3-202ENST00000594297 SMIM35A0A1B0GVV1 85 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 HIDE1A8MVS5 230 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 C2CD4DB7Z1M9 353 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 MCTP2Q6DN12 878 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 MCTP1Q6DN14 999 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
FOXA3-202ENST00000594297 TMEM40Q8WWA1 233 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 ADAM2Q99965 735 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 TCF25Q9BQ70 676 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 POMKQ9H5K3 350 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 AZI2Q9H6S1 392 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 SLC9A2Q9UBY0 812 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 GINS2Q9Y248 185 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 NR2E1Q9Y466 385 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 ATP6V1DQ9Y5K8 247 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 DENND4AQ7Z401 1863 aa17.37■□□□□ 0.37
FOXA3-202ENST00000594297 DENND3A2RUS2 1198 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 C9IYK1 514 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 RPS6KA5O75582 802 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 FGFR1P11362 822 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 LAG3P18627 525 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 FOSBP53539 338 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 WWC2Q6AWC2 1192 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 MTHFD1LQ6UB35 978 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 UBALD2Q8IYN6 164 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 MRPS27Q92552 414 aaKnown RBP17.36■□□□□ 0.37
FOXA3-202ENST00000594297 ZSCAN16Q9H4T2 348 aaPredicted RBP17.36■□□□□ 0.37
FOXA3-202ENST00000594297 CDHR5Q9HBB8 845 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 JADE2Q9NQC1 790 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 RGS18Q9NS28 235 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 C1orf112Q9NSG2 853 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 VPS54Q9P1Q0 977 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 LZTS1Q9Y250 596 aa17.36■□□□□ 0.37
FOXA3-202ENST00000594297 SMCO2A6NFE2 343 aa17.35■□□□□ 0.37
FOXA3-202ENST00000594297 ZSCAN22P10073 491 aaPredicted RBP17.35■□□□□ 0.37
FOXA3-202ENST00000594297 HOXB8P17481 243 aaPredicted RBP17.35■□□□□ 0.37
FOXA3-202ENST00000594297 PBX3P40426 434 aa17.35■□□□□ 0.37
FOXA3-202ENST00000594297 ADCY7P51828 1080 aa17.35■□□□□ 0.37
FOXA3-202ENST00000594297 ACTR2P61160 394 aa17.35■□□□□ 0.37
FOXA3-202ENST00000594297 FRMD5Q7Z6J6 570 aa17.35■□□□□ 0.37
FOXA3-202ENST00000594297 ESYT2A0FGR8 921 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 DTNBO60941 627 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 ASGR2P07307 311 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 KRT2P35908 639 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 PLCB3Q01970 1234 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 GUCY1B3Q02153 619 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 SLC24A5Q71RS6 500 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 NME8Q8N427 588 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 AIFM3Q96NN9 605 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 PPP1R16BQ96T49 567 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 PHF20Q9BVI0 1012 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 PSTPIP2Q9H939 334 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 ST3GAL5Q9UNP4 418 aa17.34■□□□□ 0.37
FOXA3-202ENST00000594297 SPDYE3A6NKU9 549 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 STAT5BP51692 787 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 ASTLQ6HA08 431 aaPredicted RBP17.33■□□□□ 0.36
FOXA3-202ENST00000594297 PLPPR4Q7Z2D5 763 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 ERMP1Q7Z2K6 904 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 FAM228AQ86W67 206 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 CASP10Q92851 521 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 TNPO1Q92973 898 aaKnown RBP17.33■□□□□ 0.36
FOXA3-202ENST00000594297 NKD2Q969F2 451 aaPredicted RBP17.33■□□□□ 0.36
FOXA3-202ENST00000594297 ZMYND12Q9H0C1 365 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
FOXA3-202ENST00000594297 ATP6V0A4Q9HBG4 840 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 KCNH7Q9NS40 1196 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 RNF19AQ9NV58 838 aa17.33■□□□□ 0.36
FOXA3-202ENST00000594297 RNF216Q9NWF9 866 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms