RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 SUGP1Q8IWZ8 645 aaKnown RBP16.65■□□□□ 0.26
PNKP-202ENST00000593706 LRRC71Q8N4P6 559 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 CCDC148Q8NFR7 591 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 VN1R2Q8NFZ6 395 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 RASGRP4Q8TDF6 673 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
PNKP-202ENST00000593706 BRF1Q92994 677 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 PBXIP1Q96AQ6 731 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 TMEM117Q9H0C3 514 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 CWH43Q9H720 699 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 ZSWIM6Q9HCJ5 1215 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 LZTS1Q9Y250 596 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 CFAP54Q96N23 3096 aa16.65■□□□□ 0.26
PNKP-202ENST00000593706 ADAMTS3O15072 1205 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 CHMP2AO43633 222 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 OATP04181 439 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 ATF7P17544 494 aaPredicted RBP16.64■□□□□ 0.25
PNKP-202ENST00000593706 TECP42680 631 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 ZXDAP98168 799 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 PRKCEQ02156 737 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 DSC3Q14574 896 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 CBX2Q14781 532 aaPredicted RBP16.64■□□□□ 0.25
PNKP-202ENST00000593706 LLGL2Q6P1M3 1020 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 PHKBQ93100 1093 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 ZNF668Q96K58 619 aaPredicted RBP16.64■□□□□ 0.25
PNKP-202ENST00000593706 ZNF558Q96NG5 402 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 TDRD15B5MCY1 1934 aaKnown RBP16.64■□□□□ 0.25
PNKP-202ENST00000593706 CACNA1HO95180 2353 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 C2orf16Q68DN1 1984 aa16.64■□□□□ 0.25
PNKP-202ENST00000593706 FSCN2O14926 492 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 EIF4BP23588 611 aaKnown RBP16.63■□□□□ 0.25
PNKP-202ENST00000593706 PSMA5P28066 241 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 PBX3P40426 434 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 KRT17Q04695 432 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 KCNT2Q6UVM3 1135 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 ZNF710Q8N1W2 664 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 NLRP7Q8WX94 980 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 CASD1Q96PB1 797 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 APOL5Q9BWW9 433 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 DISC1Q9NRI5 854 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 VPS13AQ96RL7 3174 aa16.63■□□□□ 0.25
PNKP-202ENST00000593706 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
PNKP-202ENST00000593706 GAS7O60861 476 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 SP100P23497 879 aaPredicted RBP16.62■□□□□ 0.25
PNKP-202ENST00000593706 CA8P35219 290 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 FAM189BP81408 668 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 PLCB3Q01970 1234 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 TBC1D8BQ0IIM8 1120 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 TOB2Q14106 344 aaPredicted RBP16.62■□□□□ 0.25
PNKP-202ENST00000593706 NTRK3Q16288 839 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 PKN1Q16512 942 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 ANKRD54Q6NXT1 300 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 RUFY3Q7L099 469 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 TMC7Q7Z402 723 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 BMP8AQ7Z5Y6 402 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 ZBTB33Q86T24 672 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 SUSD6Q92537 303 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 LENG9Q96B70 501 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 SLC26A6Q9BXS9 759 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 TM6SF1Q9BZW5 370 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 NGRNQ9NPE2 291 aaKnown RBP16.62■□□□□ 0.25
PNKP-202ENST00000593706 NRBP2Q9NSY0 501 aa16.62■□□□□ 0.25
PNKP-202ENST00000593706 HIDE1A8MVS5 230 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 ZNF862O60290 1169 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 CIITAP33076 1130 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 GPC3P51654 580 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 JAK3P52333 1124 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 SIGLEC14Q08ET2 396 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 UGCGQ16739 394 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 LRCH2Q5VUJ6 765 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 LRRC55Q6ZSA7 311 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 ECHDC2Q86YB7 292 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 FBXL6Q8N531 539 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 LINC01465Q8N7H1 131 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 HELQQ8TDG4 1101 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 TEKT3Q9BXF9 490 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 RNF26Q9BY78 433 aaPredicted RBP16.61■□□□□ 0.25
PNKP-202ENST00000593706 ADAMTS10Q9H324 1103 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 TSHZ2Q9NRE2 1034 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 RNF19AQ9NV58 838 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 SPG21Q9NZD8 308 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 VPS54Q9P1Q0 977 aa16.61■□□□□ 0.25
PNKP-202ENST00000593706 SEPT9Q9UHD8 586 aaPredicted RBP16.61■□□□□ 0.25
PNKP-202ENST00000593706 DMDP11532 3685 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 MSH4O15457 936 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 FGFR4P22455 802 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 PDIA3P30101 505 aaKnown RBP16.6■□□□□ 0.25
PNKP-202ENST00000593706 SFNP31947 248 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 PTPN5P54829 565 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 SMC1AQ14683 1233 aaKnown RBP16.6■□□□□ 0.25
PNKP-202ENST00000593706 CLLU1OSQ5K130 101 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 TMEM184AQ6ZMB5 413 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 PRSS33Q8NF86 280 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 RIT2Q99578 217 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 PRRX2Q99811 253 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 MRPL9Q9BYD2 267 aaKnown RBP16.6■□□□□ 0.25
PNKP-202ENST00000593706 DACT1Q9NYF0 836 aa16.6■□□□□ 0.25
PNKP-202ENST00000593706 DARSP14868 501 aaKnown RBP16.59■□□□□ 0.25
PNKP-202ENST00000593706 HOXB8P17481 243 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms