RNA–Protein interactions for RNA: ENST00000592909.1

SMCO4P1-201, Transcript of single-pass membrane protein with coiled-coil domains 4 pseudogene 1, humanhuman

BASIC

Gene SMCO4P1, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4P1-201ENST00000592909 CA8P35219 290 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 METAP2P50579 478 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 BCAR1P56945 870 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 ANTXR2P58335 489 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 PDXDC2PQ6P474 469 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 TMC5Q6UXY8 1006 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 DDX53Q86TM3 631 aaKnown RBP11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 PPFIBP1Q86W92 1011 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 CCDC60Q8IWA6 550 aaPredicted RBP11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 TEX2Q8IWB9 1127 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 SMC5Q8IY18 1101 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 ZNF710Q8N1W2 664 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 FEZF2Q8TBJ5 459 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 RSPH1Q8WYR4 309 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 RUBCNQ92622 972 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 CNTNAP3BQ96NU0 1288 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 PPP1R16BQ96T49 567 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 MYL10Q9BUA6 226 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 MRPL9Q9BYD2 267 aaKnown RBP11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 CNTNAP3Q9BZ76 1288 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 SFXN1Q9H9B4 322 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 ZNF302Q9NR11 478 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 R4GN57 208 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 GPR179Q6PRD1 2367 aa11.53□□□□□ -0.56
SMCO4P1-201ENST00000592909 ACACBO00763 2458 aa11.52□□□□□ -0.56
SMCO4P1-201ENST00000592909 KRBA1A5PL33 1030 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 E7EWF7 191 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 PLEKHA8P1O95397 391 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 VTNP04004 478 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 EIF4BP23588 611 aaKnown RBP11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 ZC3H14Q6PJT7 736 aaKnown RBP11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 CHD1LQ86WJ1 897 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 METTL13Q8N6R0 699 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 AUTS2Q8WXX7 1259 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 MTA3Q9BTC8 594 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 ADAMTS10Q9H324 1103 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 LY9Q9HBG7 655 aa11.52□□□□□ -0.57
SMCO4P1-201ENST00000592909 DNAH14Q0VDD8 3507 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 STK25O00506 426 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 MAGEB2O15479 319 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 NARSO43776 548 aaKnown RBP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 NLRP11P59045 1033 aaKnown RBP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 NONOQ15233 471 aaKnown RBP eCLIP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 LETM2Q2VYF4 491 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 B4GALNT3Q6L9W6 998 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 SWSAP1Q6NVH7 229 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 MIS18BP1Q6P0N0 1132 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 C15orf39Q6ZRI6 1047 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 NIPA1Q7RTP0 329 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 MB21D2Q8IYB1 491 aaPredicted RBP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 LINC01465Q8N7H1 131 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 RNF169Q8NCN4 708 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 IGSF21Q96ID5 467 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 DACT1Q9NYF0 836 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 MAFBQ9Y5Q3 323 aaPredicted RBP11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 TAF6LQ9Y6J9 622 aa11.51□□□□□ -0.57
SMCO4P1-201ENST00000592909 LOXHD1Q8IVV2 1947 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 DHX15O43143 795 aaKnown RBP11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 CFHP08603 1231 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 SP9P0CG40 484 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 CLCN3P51790 818 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 NUCB1Q02818 461 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 PTH1RQ03431 593 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 PHLDB3Q6NSJ2 640 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 CMTR1Q8N1G2 835 aaKnown RBP11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 TMTC2Q8N394 836 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 CMASQ8NFW8 434 aaPredicted RBP11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 RIN2Q8WYP3 895 aaPredicted RBP11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 NXPE3Q969Y0 559 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 BORCS6Q96GS4 357 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 KLHL5Q96PQ7 755 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 MAP7D2Q96T17 732 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 HINFPQ9BQA5 517 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 RHOBTB2Q9BYZ6 727 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 TBC1D17Q9HA65 648 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 DLGAP2Q9P1A6 1054 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 CEP131Q9UPN4 1083 aa11.5□□□□□ -0.57
SMCO4P1-201ENST00000592909 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 hCG_1642624A0A1W2PR95 340 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 DDX39AO00148 427 aaKnown RBP11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 N4BP1O75113 896 aaKnown RBP11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 ZC3H11AO75152 810 aaKnown RBP eCLIP11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 GALTP07902 379 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 CALM1P0DP23 149 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 CALM2P0DP24 149 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 CALM3P0DP25 149 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 SRFP11831 508 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 DARSP14868 501 aaKnown RBP11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 RFX1P22670 979 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 TMOD1P28289 359 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 CLCN4P51793 760 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 PTPN14Q15678 1187 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 RSPO4Q2I0M5 234 aaPredicted RBP11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 EFCAB12Q6NXP0 572 aa11.49□□□□□ -0.57
SMCO4P1-201ENST00000592909 CYP26C1Q6V0L0 522 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms