RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SUCLA2Q9P2R7 463 aaPredicted RBP23.92■■□□□ 1.42
LRP3-202ENST00000590275 ADGRA3Q8IWK6 1321 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 A0A087WZ62 844 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 GJB2P29033 226 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 FAM189BP81408 668 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 TTC38Q5R3I4 469 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 NPAS4Q8IUM7 802 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 TMEM143Q96AN5 459 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 FDXACB1Q9BRP7 624 aaPredicted RBP23.91■■□□□ 1.42
LRP3-202ENST00000590275 ZSWIM4Q9H7M6 989 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 XPNPEP1Q9NQW7 623 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 HCSTQ9UBK5 93 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 PCDHB6Q9Y5E3 794 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 GTF3C3Q9Y5Q9 886 aa23.91■■□□□ 1.42
LRP3-202ENST00000590275 GPR182O15218 404 aa23.9■■□□□ 1.42
LRP3-202ENST00000590275 SARSP49591 514 aaKnown RBP23.9■■□□□ 1.42
LRP3-202ENST00000590275 TMEM192Q8IY95 271 aa23.9■■□□□ 1.42
LRP3-202ENST00000590275 FBXO22Q8NEZ5 403 aa23.9■■□□□ 1.42
LRP3-202ENST00000590275 RNF19AQ9NV58 838 aa23.9■■□□□ 1.42
LRP3-202ENST00000590275 MRPL42Q9Y6G3 142 aaKnown RBP23.9■■□□□ 1.42
LRP3-202ENST00000590275 PRRC2BQ5JSZ5 2229 aaKnown RBP23.9■■□□□ 1.42
LRP3-202ENST00000590275 MED24O75448 989 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 LYPLA2O95372 231 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 TECP42680 631 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 PAN2Q504Q3 1202 aaKnown RBP23.89■■□□□ 1.41
LRP3-202ENST00000590275 FAM102BQ5T8I3 360 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 RHPN2Q8IUC4 686 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 PIGOQ8TEQ8 1089 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 NLRP7Q8WX94 980 aa23.89■■□□□ 1.41
LRP3-202ENST00000590275 OR52Z1P0C646 297 aa23.88■■□□□ 1.41
LRP3-202ENST00000590275 IL17AQ16552 155 aa23.88■■□□□ 1.41
LRP3-202ENST00000590275 XKR9Q5GH70 373 aa23.88■■□□□ 1.41
LRP3-202ENST00000590275 FIBCD1Q8N539 461 aa23.88■■□□□ 1.41
LRP3-202ENST00000590275 PRPF31Q8WWY3 499 aaKnown RBP23.88■■□□□ 1.41
LRP3-202ENST00000590275 CLP1Q92989 425 aaKnown RBP23.88■■□□□ 1.41
LRP3-202ENST00000590275 IFT122Q9HBG6 1241 aa23.88■■□□□ 1.41
LRP3-202ENST00000590275 DENND3A2RUS2 1198 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 DKC1O60832 514 aaKnown RBP eCLIP23.87■■□□□ 1.413e-8■■■■■ 37.5
LRP3-202ENST00000590275 FGFR1P11362 822 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 BTG3Q14201 252 aaPredicted RBP23.87■■□□□ 1.41
LRP3-202ENST00000590275 EMC2Q15006 297 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 ECM1Q16610 540 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 SLC24A5Q71RS6 500 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 CATSPER3Q86XQ3 398 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 MINDY3Q9H8M7 445 aa23.87■■□□□ 1.41
LRP3-202ENST00000590275 H3BNC9 293 aa23.86■■□□□ 1.41
LRP3-202ENST00000590275 BMPR1AP36894 532 aa23.86■■□□□ 1.41
LRP3-202ENST00000590275 TRAPPC10P48553 1259 aa23.86■■□□□ 1.41
LRP3-202ENST00000590275 MCM2P49736 904 aa23.86■■□□□ 1.41
LRP3-202ENST00000590275 POLGP54098 1239 aaPredicted RBP23.86■■□□□ 1.41
LRP3-202ENST00000590275 CUL4AQ13619 759 aa23.86■■□□□ 1.41
LRP3-202ENST00000590275 NLRP4Q96MN2 994 aa23.86■■□□□ 1.41
LRP3-202ENST00000590275 C5orf67F2Z3F1 127 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 GTPBP6O43824 516 aaPredicted RBP23.85■■□□□ 1.41
LRP3-202ENST00000590275 ATF7P17544 494 aaPredicted RBP23.85■■□□□ 1.41
LRP3-202ENST00000590275 RFC5P40937 340 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 RARRES1P49788 294 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 DNM2P50570 870 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 GPM6BQ13491 265 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 GNL2Q13823 731 aaKnown RBP23.85■■□□□ 1.41
LRP3-202ENST00000590275 CMTR2Q8IYT2 770 aaKnown RBP23.85■■□□□ 1.41
LRP3-202ENST00000590275 NEK9Q8TD19 979 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 SLC7A3Q8WY07 619 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 SCLT1Q96NL6 688 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 GCOM2Q9BZD3 368 aaPredicted RBP23.85■■□□□ 1.41
LRP3-202ENST00000590275 C1orf112Q9NSG2 853 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 PCDHB7Q9Y5E2 793 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 COL4A3BPQ9Y5P4 624 aa23.85■■□□□ 1.41
LRP3-202ENST00000590275 GRM6O15303 877 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 STAG3L1P0CL83 205 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 CTNNB1P35222 781 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 TFF2Q03403 129 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 LAMTOR4Q0VGL1 99 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 PTGDRQ13258 359 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 ORC2Q13416 577 aaPredicted RBP23.84■■□□□ 1.41
LRP3-202ENST00000590275 POTEGQ6S5H5 508 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 OTUD6AQ7L8S5 288 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 ZNF410Q86VK4 478 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 ECHDC2Q86YB7 292 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 ZNF710Q8N1W2 664 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 IL27Q8NEV9 243 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 ASAP3Q8TDY4 903 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 SAMD11Q96NU1 681 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.84■■□□□ 1.41
LRP3-202ENST00000590275 ANKEF1Q9NU02 776 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 PPME1Q9Y570 386 aa23.84■■□□□ 1.41
LRP3-202ENST00000590275 SRGAP2CP0DJJ0 459 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 CAMK1Q14012 370 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 ODR4Q5SWX8 454 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 MCTP1Q6DN14 999 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 ZNF598Q86UK7 904 aaKnown RBP23.83■■□□□ 1.41
LRP3-202ENST00000590275 FERMT3Q86UX7 667 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 POLR3CQ9BUI4 534 aaPredicted RBP23.83■■□□□ 1.41
LRP3-202ENST00000590275 COL25A1Q9BXS0 654 aaPredicted RBP23.83■■□□□ 1.41
LRP3-202ENST00000590275 TMEM161AQ9NX61 479 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 LMCD1Q9NZU5 365 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 LRFN2Q9ULH4 789 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 SMC3Q9UQE7 1217 aa23.83■■□□□ 1.41
LRP3-202ENST00000590275 TBKBP1A7MCY6 615 aa23.82■■□□□ 1.4
LRP3-202ENST00000590275 PP2D1A8MPX8 630 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms