RNA–Protein interactions for RNA: ENST00000590208.5

MBD1-222, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-222ENST00000590208 COPS2P61201 443 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 AUHQ13825 339 aaKnown RBP17.07■□□□□ 0.32
MBD1-222ENST00000590208 UBE2SQ16763 222 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 SPDYCQ5MJ68 293 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 C6orf118Q5T5N4 469 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 GPBP1Q86WP2 473 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 ALG3Q92685 438 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 NSRP1Q9H0G5 558 aaKnown RBP17.07■□□□□ 0.32
MBD1-222ENST00000590208 CCDC134Q9H6E4 229 aa17.07■□□□□ 0.32
MBD1-222ENST00000590208 OAS1P00973 400 aaKnown RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 AFPP02771 609 aaKnown RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 MSH2P43246 934 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 RPL21P46778 160 aaKnown RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 BNIP1Q12981 228 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 NUGGCQ68CJ6 796 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 DZIP1Q86YF9 867 aaKnown RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 EGFL6Q8IUX8 553 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 CCDC65Q8IXS2 484 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 FITM2Q8N6M3 262 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 TGFBRAP1Q8WUH2 860 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 LZTS2Q9BRK4 669 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 SIX2Q9NPC8 291 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 SPATS2LQ9NUQ6 558 aaKnown RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 BTG4Q9NY30 223 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 FRMPD2Q68DX3 1309 aaPredicted RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 POTEB3A0JP26 581 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 POTECB2RU33 542 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 RASGRF2O14827 1237 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 MARCH6O60337 910 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 CAMTA2O94983 1202 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 POTEBQ6S5H4 581 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 EXOC3L1Q86VI1 746 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 COL23A1Q86Y22 540 aaPredicted RBP17.06■□□□□ 0.32
MBD1-222ENST00000590208 RNF217Q8TC41 542 aa17.06■□□□□ 0.32
MBD1-222ENST00000590208 USP17L5A8MUK1 530 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 PLA2G4BP0C869 781 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 PLCG2P16885 1265 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 MAPK7Q13164 816 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 PLS1Q14651 629 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 DIXDC1Q155Q3 683 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 THEMIS2Q5TEJ8 643 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 INTS5Q6P9B9 1019 aaKnown RBP17.05■□□□□ 0.32
MBD1-222ENST00000590208 SPDYE1Q8NFV5 336 aaPredicted RBP17.05■□□□□ 0.32
MBD1-222ENST00000590208 ARHGEF26Q96DR7 871 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 BCAS3Q9H6U6 928 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 TTC7AQ9ULT0 858 aaPredicted RBP17.05■□□□□ 0.32
MBD1-222ENST00000590208 A0A0A6YYK5 440 aaPredicted RBP17.05■□□□□ 0.32
MBD1-222ENST00000590208 AKAP3O75969 853 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 MYBL1P10243 752 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 CASP4P49662 377 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 ADCY2Q08462 1091 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 LONRF1Q17RB8 773 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 ERFEQ4G0M1 354 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 VPS36Q86VN1 386 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 CNKSR1Q969H4 720 aa17.05■□□□□ 0.32
MBD1-222ENST00000590208 BSDC1Q9NW68 430 aaPredicted RBP17.05■□□□□ 0.32
MBD1-222ENST00000590208 KRT18P05783 430 aaKnown RBP17.04■□□□□ 0.32
MBD1-222ENST00000590208 CALRP27797 417 aaKnown RBP17.04■□□□□ 0.32
MBD1-222ENST00000590208 HIBADHP31937 336 aaKnown RBP17.04■□□□□ 0.32
MBD1-222ENST00000590208 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
MBD1-222ENST00000590208 EPHA7Q15375 998 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 PARP10Q53GL7 1025 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 CCDC25Q86WR0 208 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 MAPKAPK5Q8IW41 473 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 ZDHHC14Q8IZN3 488 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 ANKRD42Q8N9B4 389 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 SLC17A8Q8NDX2 589 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 OLIG1Q8TAK6 271 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 RMDN2Q96LZ7 410 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 ARHGEF3Q9NR81 526 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 BCL9O00512 1426 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 GOLGA6L10A0A0M3HER8 536 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 ANKRD63C9JTQ0 380 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 LINGO3P0C6S8 592 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 XRCC5P13010 732 aaKnown RBP17.04■□□□□ 0.32
MBD1-222ENST00000590208 ATP2A2P16615 1042 aaKnown RBP17.04■□□□□ 0.32
MBD1-222ENST00000590208 CYP11B2P19099 503 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 JAM2P57087 298 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 TRIM68Q6AZZ1 485 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 GDAP1Q8TB36 358 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 TAS2R14Q9NYV8 317 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 GCNT4Q9P109 453 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 ITGB4P16144 1822 aa17.04■□□□□ 0.32
MBD1-222ENST00000590208 RIPK2O43353 540 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 PPATQ06203 517 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 BLMHQ13867 455 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 CRAMP1Q96RY5 1269 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 DDX25Q9UHL0 483 aaKnown RBP17.03■□□□□ 0.32
MBD1-222ENST00000590208 PCDHA12Q9UN75 941 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 TMEM120BA0PK00 339 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 SUN1O94901 812 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 GH1P01241 217 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 HOXD13P35453 343 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 PTGIRP43119 386 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 MARCKSL1P49006 195 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 ZNF131P52739 623 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 NPEPPSP55786 919 aa17.03■□□□□ 0.32
MBD1-222ENST00000590208 ARSHQ5FYA8 562 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms