RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 SIGLEC14Q08ET2 396 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 TCF15Q12870 199 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 KRT32Q14532 448 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 ECHDC2Q86YB7 292 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 LRRC43Q8N309 656 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 BRF1Q92994 677 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 PHKBQ93100 1093 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 GJA10Q969M2 543 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 C6orf50Q9HD87 102 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 ENTPD7Q9NQZ7 604 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 CEP131Q9UPN4 1083 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 SAMM50Q9Y512 469 aa15.74■□□□□ 0.11
SF3A2-205ENST00000590034 MYO15AQ9UKN7 3530 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 FSD2A1L4K1 749 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 WDR64B1ANS9 1081 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 MSH4O15457 936 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 PRPF3O43395 683 aaKnown RBP15.73■□□□□ 0.11
SF3A2-205ENST00000590034 OATP04181 439 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 FGFR4P22455 802 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 SP100P23497 879 aaPredicted RBP15.73■□□□□ 0.11
SF3A2-205ENST00000590034 GPC3P51654 580 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 VCPP55072 806 aaKnown RBP15.73■□□□□ 0.11
SF3A2-205ENST00000590034 PRKCEQ02156 737 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 DRP2Q13474 957 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 NTRK3Q16288 839 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 Q6ZUG5 572 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 ZNF598Q86UK7 904 aaKnown RBP15.73■□□□□ 0.11
SF3A2-205ENST00000590034 FBXL6Q8N531 539 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 KCNB2Q92953 911 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 FAM167AQ96KS9 214 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 ZNF558Q96NG5 402 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 MAP7D2Q96T17 732 aa15.73■□□□□ 0.11
SF3A2-205ENST00000590034 CCDC196A0A1B0GTZ2 297 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 HOXA2O43364 376 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 CSDE1O75534 798 aaKnown RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 HMGB1P09429 215 aaKnown RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 DARSP14868 501 aaKnown RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 GNA11P29992 359 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 FGD1P98174 961 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 PTPN21Q16825 1174 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 SUGP1Q8IWZ8 645 aaKnown RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 SLC39A11Q8N1S5 342 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 RNF169Q8NCN4 708 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 CCDC12Q8WUD4 166 aaPredicted RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 NGRNQ9NPE2 291 aaKnown RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 DISC1Q9NRI5 854 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 VPS54Q9P1Q0 977 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 TCEAL9Q9UHQ7 104 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 PUF60Q9UHX1 559 aaKnown RBP15.72■□□□□ 0.11
SF3A2-205ENST00000590034 HCFC2Q9Y5Z7 792 aa15.72■□□□□ 0.11
SF3A2-205ENST00000590034 A0A0U1RQF3 1178 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 TMEM150BA6NC51 233 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 CHMP2AO43633 222 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 CDC45O75419 566 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 PDGFBP01127 241 aaPredicted RBP15.71■□□□□ 0.11
SF3A2-205ENST00000590034 SRGAP2BP0DMP2 458 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 ZSCAN20P17040 1043 aaPredicted RBP15.71■□□□□ 0.11
SF3A2-205ENST00000590034 TMOD1P28289 359 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 PPM1AP35813 382 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 PTPN5P54829 565 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 MCTP2Q6DN12 878 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 TMEM173Q86WV6 379 aaPredicted RBP15.71■□□□□ 0.11
SF3A2-205ENST00000590034 ABI1Q8IZP0 508 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 HELQQ8TDG4 1101 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 JAKMIP1Q96N16 626 aaKnown RBP15.71■□□□□ 0.11
SF3A2-205ENST00000590034 CEP89Q96ST8 783 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 UNC45AQ9H3U1 944 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 SPG21Q9NZD8 308 aa15.71■□□□□ 0.11
SF3A2-205ENST00000590034 DMDP11532 3685 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 C2orf71A6NGG8 1288 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 TARBP2Q15633 366 aaKnown RBP15.7■□□□□ 0.1
SF3A2-205ENST00000590034 TMC7Q7Z402 723 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 MRPL43Q8N983 215 aaKnown RBP15.7■□□□□ 0.1
SF3A2-205ENST00000590034 SLC5A5Q92911 643 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 CCDC136Q96JN2 1154 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 RNF26Q9BY78 433 aaPredicted RBP15.7■□□□□ 0.1
SF3A2-205ENST00000590034 AGXT2Q9BYV1 514 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 SNX14Q9Y5W7 946 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 CFAP54Q96N23 3096 aa15.7■□□□□ 0.1
SF3A2-205ENST00000590034 PLXNA3P51805 1871 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 DENND4AQ7Z401 1863 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 ZFHX2Q9C0A1 2572 aaPredicted RBP15.69■□□□□ 0.1
SF3A2-205ENST00000590034 NT5C1B-RDH14C9J2C7 533 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 GAS7O60861 476 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 CLASP2O75122 1294 aaKnown RBP15.69■□□□□ 0.1
SF3A2-205ENST00000590034 STBD1O95210 358 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 HOXB8P17481 243 aaPredicted RBP15.69■□□□□ 0.1
SF3A2-205ENST00000590034 HSPA4P34932 840 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 KRT17Q04695 432 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 TBC1D8BQ0IIM8 1120 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 SMC1AQ14683 1233 aaKnown RBP15.69■□□□□ 0.1
SF3A2-205ENST00000590034 LRCH2Q5VUJ6 765 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 FBXL16Q8N461 479 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 FEZF2Q8TBJ5 459 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 BICD2Q8TD16 824 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 NLRP7Q8WX94 980 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 SCLT1Q96NL6 688 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 RIT2Q99578 217 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 SH2D3AQ9BRG2 576 aa15.69■□□□□ 0.1
SF3A2-205ENST00000590034 SLC26A6Q9BXS9 759 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms