RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GSTTP1A0A1W2PQM5 241 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 KANSL1LA0AUZ9 987 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 DENND3A2RUS2 1198 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 LRP3O75074 770 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 RETP07949 1114 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 ZFYP08048 801 aaPredicted RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 INSRRP14616 1297 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 GBP2P32456 591 aaPredicted RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 CA8P35219 290 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 METAP2P50579 478 aaKnown RBP eCLIP7.04□□□□□ -1.28
VPS25-204ENST00000589577 CLCN4P51793 760 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 KRT76Q01546 638 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 SNW1Q13573 536 aaKnown RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 NEDD9Q14511 834 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 DSC3Q14574 896 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 CSRP2Q16527 193 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 SOWAHCQ53LP3 525 aaPredicted RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 CLLU1OSQ5K130 101 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 VPS53Q5VIR6 699 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 VPS52Q8N1B4 723 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 EXOC6Q8TAG9 804 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 DDX1Q92499 740 aaKnown RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 GLG1Q92896 1179 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 CCDC136Q96JN2 1154 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 PCYT2Q99447 389 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 RPP25Q9BUL9 199 aaKnown RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 BCO2Q9BYV7 579 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 RWDD1Q9H446 243 aaPredicted RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 ELAC1Q9H777 363 aaKnown RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 ATP6V0A4Q9HBG4 840 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 WDR6Q9NNW5 1121 aaKnown RBP7.04□□□□□ -1.28
VPS25-204ENST00000589577 RXFP3Q9NSD7 469 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 NUMBLQ9Y6R0 609 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 SPAG17Q6Q759 2223 aa7.04□□□□□ -1.28
VPS25-204ENST00000589577 SHISA7A6NL88 538 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 M0QZ92 97 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 FIBPO43427 364 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 ATP9AO75110 1047 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 RAB11FIP3O75154 756 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 RPLP2P05387 115 aaKnown RBP7.03□□□□□ -1.28
VPS25-204ENST00000589577 CTSAP10619 480 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 SPINK2P20155 84 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 CD72P21854 359 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 BCAR1P56945 870 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 GPC5P78333 572 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 FZD5Q13467 585 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 UBXN2BQ14CS0 331 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 NONOQ15233 471 aaKnown RBP eCLIP7.03□□□□□ -1.28
VPS25-204ENST00000589577 CCDC6Q16204 474 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 GNPTABQ3T906 1256 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 RRP12Q5JTH9 1297 aaKnown RBP7.03□□□□□ -1.28
VPS25-204ENST00000589577 ZMYM1Q5SVZ6 1142 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 FAM228AQ86W67 206 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 CMASQ8NFW8 434 aaPredicted RBP7.03□□□□□ -1.28
VPS25-204ENST00000589577 BBXQ8WY36 941 aaPredicted RBP7.03□□□□□ -1.28
VPS25-204ENST00000589577 GATA6Q92908 595 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 NXPE3Q969Y0 559 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 CLDN23Q96B33 292 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 TTC14Q96N46 770 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 OSBPL6Q9BZF3 934 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 LTB4R2Q9NPC1 389 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 ZBTB40Q9NUA8 1239 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 PPP4R2Q9NY27 417 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 MAP3K20Q9NYL2 800 aaKnown RBP7.03□□□□□ -1.28
VPS25-204ENST00000589577 ERAP1Q9NZ08 941 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 RTEL1Q9NZ71 1219 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 ST3GAL5Q9UNP4 418 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 PCDHA2Q9Y5H9 948 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 PCDHA1Q9Y5I3 950 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 SDK1Q7Z5N4 2213 aa7.03□□□□□ -1.28
VPS25-204ENST00000589577 CFAP46Q8IYW2 2715 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 WDR81Q562E7 1941 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 NOTCH4Q99466 2003 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 SMIM35A0A1B0GVV1 85 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 FAM170BA6NMN3 283 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 SMARCA5O60264 1052 aaPredicted RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 RPS6KA5O75582 802 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 PAPLNO95428 1278 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 TOP3BO95985 862 aaKnown RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 CNPP09543 421 aaKnown RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 LAMP2P13473 410 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 KCNA2P16389 499 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 TARSP26639 723 aaKnown RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 LIMK1P53667 647 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 MTAPQ13126 283 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 PLCB4Q15147 1175 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 MLF2Q15773 248 aaPredicted RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 SLC35G1Q2M3R5 365 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 FCHSD1Q86WN1 690 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 FGF14Q92915 247 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 ZNF707Q96C28 371 aaPredicted RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 MTMR8Q96EF0 704 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 SHDQ96IW2 340 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 KLHL5Q96PQ7 755 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 SENP7Q9BQF6 1050 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 AMNQ9BXJ7 453 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 FAM126AQ9BYI3 521 aaPredicted RBP7.02□□□□□ -1.29
VPS25-204ENST00000589577 VAT1LQ9HCJ6 419 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 TOMM22Q9NS69 142 aa7.02□□□□□ -1.29
VPS25-204ENST00000589577 ECHDC1Q9NTX5 307 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms