RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 DNM2P50570 870 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 BTG3Q14201 252 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 TMEM266Q2M3C6 531 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 NCAPH2Q6IBW4 605 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 B3GNT9Q6UX72 402 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 CMTR2Q8IYT2 770 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 LRRC71Q8N4P6 559 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 NEK9Q8TD19 979 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 CCDC43Q96MW1 224 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 C17orf80Q9BSJ5 609 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 C11orf84Q9BUA3 381 aaPredicted RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 NIFKQ9BYG3 293 aaKnown RBP11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 SUGCTQ9HAC7 445 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 ERVK-5Q9HDB9 667 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 GJB4Q9NTQ9 266 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 VAV3Q9UKW4 847 aa11.88□□□□□ -0.51
CLPTM1-211ENST00000589347 GAS2O43903 313 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 P4HBP07237 508 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 IL9P15248 144 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 ORC2Q13416 577 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 GPM6BQ13491 265 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 EPC2Q52LR7 807 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 FAM228AQ86W67 206 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 TMEM192Q8IY95 271 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 LINC01599Q8WXQ3 324 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 SLC7A3Q8WY07 619 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 TNFRSF25Q93038 417 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 LXNQ9BS40 222 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 NOL7Q9UMY1 257 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 NOC2LQ9Y3T9 749 aaKnown RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 PCDHB7Q9Y5E2 793 aa11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 ZFHX2Q9C0A1 2572 aaPredicted RBP11.87□□□□□ -0.51
CLPTM1-211ENST00000589347 MYO15AQ9UKN7 3530 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 DDX11L8A8MPP1 907 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 BTBD18B2RXH4 712 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 HOXA2O43364 376 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 GPR32O75388 356 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 RB1P06400 928 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 IBSPP21815 317 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 SFPQP23246 707 aaKnown RBP eCLIP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 RFC5P40937 340 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 GPC3P51654 580 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 POLGP54098 1239 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 NLRP11P59045 1033 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 ST3GAL1Q11201 340 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 EPHA7Q15375 998 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 TARBP2Q15633 366 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 OTUD6AQ7L8S5 288 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 ZNF410Q86VK4 478 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 CEP170P1Q96L14 293 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 PHOX2BQ99453 314 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 ADAM2Q99965 735 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 PLVAPQ9BX97 442 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 GCOM2Q9BZD3 368 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 INO80BQ9C086 356 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 LMAN2LQ9H0V9 348 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 FOXP1Q9H334 677 aaPredicted RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 ZSWIM4Q9H7M6 989 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 RC3H2Q9HBD1 1191 aaKnown RBP11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 RGS18Q9NS28 235 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 ST3GAL5Q9UNP4 418 aa11.86□□□□□ -0.51
CLPTM1-211ENST00000589347 FAM205CA6NFA0 338 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 C5orf67F2Z3F1 127 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 H3BNC9 293 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 DTNBO60941 627 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 DGKIO75912 1065 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 KCNA5P22460 613 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 EIF4BP23588 611 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 MCM2P49736 904 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 GUCY1B3Q02153 619 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 EARS2Q5JPH6 523 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 SPOUT1Q5T280 376 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 PLA2G4FQ68DD2 849 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 PTCRAQ6ISU1 281 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 HFE2Q6ZVN8 426 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 SLC24A5Q71RS6 500 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 C4orf19Q8IY42 314 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 TMEM40Q8WWA1 233 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 TCP11Q8WWU5 503 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 HAS1Q92839 578 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 PPP2R3CQ969Q6 453 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 ZNF689Q96CS4 500 aaPredicted RBP11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 MRPL38Q96DV4 380 aaKnown RBP11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 TMX1Q9H3N1 280 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 ATP6V0A4Q9HBG4 840 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 CYP26B1Q9NR63 512 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 AAASQ9NRG9 546 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 TECTAO75443 2155 aa11.85□□□□□ -0.51
CLPTM1-211ENST00000589347 MYO7AQ13402 2215 aa11.84□□□□□ -0.51
CLPTM1-211ENST00000589347 VPS13AQ96RL7 3174 aa11.84□□□□□ -0.51
CLPTM1-211ENST00000589347 EML1O00423 815 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms