RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 AKT3Q9Y243 479 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 V9GY48 417 aaPredicted RBP17.15■□□□□ 0.34
SF3A2-204ENST00000589118 CNTNAP5Q8WYK1 1306 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 C2orf16Q68DN1 1984 aa17.15■□□□□ 0.34
SF3A2-204ENST00000589118 FSD2A1L4K1 749 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 SMCO2A6NFE2 343 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 NPR3P17342 541 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 BCAR1P56945 870 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 AAMPQ13685 434 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 ODR4Q5SWX8 454 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 EFCAB12Q6NXP0 572 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 MIS18BP1Q6P0N0 1132 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 TMC5Q6UXY8 1006 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 ABI1Q8IZP0 508 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 LRRC43Q8N309 656 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 BCL7CQ8WUZ0 217 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-204ENST00000589118 NKD2Q969F2 451 aaPredicted RBP17.14■□□□□ 0.33
SF3A2-204ENST00000589118 TCEANC2Q96MN5 208 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 GABBR1Q9UBS5 961 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 DBR1Q9UK59 544 aaKnown RBP17.14■□□□□ 0.33
SF3A2-204ENST00000589118 DENND4AQ7Z401 1863 aa17.14■□□□□ 0.33
SF3A2-204ENST00000589118 IGLV3-22A0A075B6J6 115 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 SLC27A2O14975 620 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 ZSCAN20P17040 1043 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-204ENST00000589118 ID4P47928 161 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 ADCY7P51828 1080 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 NUBP1P53384 320 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 ITIH3Q06033 890 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 VPS52Q8N1B4 723 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 TDRD5Q8NAT2 981 aaKnown RBP17.13■□□□□ 0.33
SF3A2-204ENST00000589118 LPPQ93052 612 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 DCHS1Q96JQ0 3298 aa17.13■□□□□ 0.33
SF3A2-204ENST00000589118 VPS13AQ96RL7 3174 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 MEIS3P2A8K0S8 358 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 IPO5O00410 1097 aaKnown RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 CALM1P0DP23 149 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 CALM2P0DP24 149 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 CALM3P0DP25 149 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 MYBP10242 640 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 SREBF1P36956 1147 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 LIFRP42702 1097 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 MTHFRP42898 656 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 CLK2P49760 499 aaKnown RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 FUT2Q10981 343 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 ZNF598Q86UK7 904 aaKnown RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 TMTC2Q8N394 836 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 SLC22A17Q8WUG5 538 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 BBXQ8WY36 941 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 NECTIN4Q96NY8 510 aa17.12■□□□□ 0.33
SF3A2-204ENST00000589118 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 MAFBQ9Y5Q3 323 aaPredicted RBP17.12■□□□□ 0.33
SF3A2-204ENST00000589118 NARSO43776 548 aaKnown RBP17.11■□□□□ 0.33
SF3A2-204ENST00000589118 PPM1AP35813 382 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 FOXK2Q01167 660 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 DRP2Q13474 957 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 ATAT1Q5SQI0 421 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 ZDHHC14Q8IZN3 488 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 LINC01465Q8N7H1 131 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 ZNF577Q9BSK1 485 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 LSG1Q9H089 658 aaKnown RBP17.11■□□□□ 0.33
SF3A2-204ENST00000589118 ZBP1Q9H171 429 aa17.11■□□□□ 0.33
SF3A2-204ENST00000589118 HOXA2O43364 376 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 ZNF862O60290 1169 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 B4GALT3O60512 393 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 ZC3H11AO75152 810 aaKnown RBP eCLIP17.1■□□□□ 0.33
SF3A2-204ENST00000589118 EOMESO95936 686 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 FOSP01100 380 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-204ENST00000589118 SSBP05455 408 aaKnown RBP eCLIP17.1■□□□□ 0.33
SF3A2-204ENST00000589118 EIF4BP23588 611 aaKnown RBP17.1■□□□□ 0.33
SF3A2-204ENST00000589118 CLCN5P51795 746 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 KIAA1841Q6NSI8 718 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 RSAD2Q8WXG1 361 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 GJA10Q969M2 543 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 SH2D3AQ9BRG2 576 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 VN1R3Q9BXE9 311 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 DNAJB4Q9UDY4 337 aa17.1■□□□□ 0.33
SF3A2-204ENST00000589118 GVINP1Q7Z2Y8 2422 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 TMEM150BA6NC51 233 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 CDC27P30260 824 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 ALDH7A1P49419 539 aaKnown RBP17.09■□□□□ 0.33
SF3A2-204ENST00000589118 GPC3P51654 580 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 UGCGQ16739 394 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 ST13P5Q8NFI4 369 aaPredicted RBP17.09■□□□□ 0.33
SF3A2-204ENST00000589118 CRYGNQ8WXF5 182 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 TMEM169Q96HH4 297 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 MTA3Q9BTC8 594 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 GBP3Q9H0R5 595 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 NRDE2Q9H7Z3 1164 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 INPP5FQ9Y2H2 1132 aa17.09■□□□□ 0.33
SF3A2-204ENST00000589118 DARSP14868 501 aaKnown RBP17.08■□□□□ 0.32
SF3A2-204ENST00000589118 AOC1P19801 751 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 ANGPT1Q15389 498 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 MCTP2Q6DN12 878 aa17.08■□□□□ 0.32
SF3A2-204ENST00000589118 APOA5Q6Q788 366 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms