RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ECHDC2Q86YB7 292 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 LRRC43Q8N309 656 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 FBXL16Q8N461 479 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 RPGRIP1Q96KN7 1286 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 FAM167AQ96KS9 214 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 TCF25Q9BQ70 676 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 AGXT2Q9BYV1 514 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 C6orf50Q9HD87 102 aa20.85■□□□□ 0.93
CCDC43-204ENST00000588687 CCDC196A0A1B0GTZ2 297 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 WDR64B1ANS9 1081 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 MSH4O15457 936 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 OATP04181 439 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 EIF4BP23588 611 aaKnown RBP20.84■□□□□ 0.93
CCDC43-204ENST00000588687 GPC3P51654 580 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 PRKCEQ02156 737 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 TCF15Q12870 199 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 EFCAB12Q6NXP0 572 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 BRF1Q92994 677 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 PHKBQ93100 1093 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 PBXIP1Q96AQ6 731 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 CDH22Q9UJ99 828 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 AKT3Q9Y243 479 aa20.84■□□□□ 0.93
CCDC43-204ENST00000588687 HOXA2O43364 376 aa20.83■□□□□ 0.93
CCDC43-204ENST00000588687 DARSP14868 501 aaKnown RBP20.83■□□□□ 0.93
CCDC43-204ENST00000588687 PPM1AP35813 382 aa20.83■□□□□ 0.93
CCDC43-204ENST00000588687 SIGLEC14Q08ET2 396 aa20.83■□□□□ 0.93
CCDC43-204ENST00000588687 TARBP2Q15633 366 aaKnown RBP20.83■□□□□ 0.93
CCDC43-204ENST00000588687 Q6ZUG5 572 aa20.83■□□□□ 0.93
CCDC43-204ENST00000588687 CCDC12Q8WUD4 166 aaPredicted RBP20.83■□□□□ 0.93
CCDC43-204ENST00000588687 CEP89Q96ST8 783 aa20.83■□□□□ 0.93
CCDC43-204ENST00000588687 MAP7D2Q96T17 732 aa20.83■□□□□ 0.93
CCDC43-204ENST00000588687 DENND4AQ7Z401 1863 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 CDC45O75419 566 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 GNA11P29992 359 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 TECP42680 631 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 DRP2Q13474 957 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 PTPN21Q16825 1174 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 SLC39A11Q8N1S5 342 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 FBXL6Q8N531 539 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 SLC5A5Q92911 643 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 ZNF668Q96K58 619 aaPredicted RBP20.82■□□□□ 0.92
CCDC43-204ENST00000588687 ZNF558Q96NG5 402 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 NGRNQ9NPE2 291 aaKnown RBP20.82■□□□□ 0.92
CCDC43-204ENST00000588687 ENTPD7Q9NQZ7 604 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 DISC1Q9NRI5 854 aa20.82■□□□□ 0.92
CCDC43-204ENST00000588687 NAP1L2Q9ULW6 460 aaPredicted RBP20.82■□□□□ 0.92
CCDC43-204ENST00000588687 A0A0U1RQF3 1178 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 VCPP55072 806 aaKnown RBP20.81■□□□□ 0.92
CCDC43-204ENST00000588687 B3GNT9Q6UX72 402 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 ZNF710Q8N1W2 664 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 RIT2Q99578 217 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 RNF26Q9BY78 433 aaPredicted RBP20.81■□□□□ 0.92
CCDC43-204ENST00000588687 UNC45AQ9H3U1 944 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 VPS54Q9P1Q0 977 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 SAMM50Q9Y512 469 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 SNX14Q9Y5W7 946 aa20.81■□□□□ 0.92
CCDC43-204ENST00000588687 STBD1O95210 358 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 FGFR4P22455 802 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 HSPA4P34932 840 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 PTPN5P54829 565 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 LLGL2Q6P1M3 1020 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 GJA10Q969M2 543 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 JAKMIP1Q96N16 626 aaKnown RBP20.8■□□□□ 0.92
CCDC43-204ENST00000588687 APOL5Q9BWW9 433 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 SPG21Q9NZD8 308 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 TCEAL9Q9UHQ7 104 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 PUF60Q9UHX1 559 aaKnown RBP20.8■□□□□ 0.92
CCDC43-204ENST00000588687 HCFC2Q9Y5Z7 792 aa20.8■□□□□ 0.92
CCDC43-204ENST00000588687 C2orf71A6NGG8 1288 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 PSMD10O75832 226 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 SRGAP2BP0DMP2 458 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 IFNAR1P17181 557 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 HOXB8P17481 243 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-204ENST00000588687 TMOD1P28289 359 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 EVCP57679 992 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 CENPQQ7L2Z9 268 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-204ENST00000588687 TMEM173Q86WV6 379 aaPredicted RBP20.79■□□□□ 0.92
CCDC43-204ENST00000588687 SUGP1Q8IWZ8 645 aaKnown RBP20.79■□□□□ 0.92
CCDC43-204ENST00000588687 MRPL43Q8N983 215 aaKnown RBP20.79■□□□□ 0.92
CCDC43-204ENST00000588687 CCDC148Q8NFR7 591 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 BICD2Q8TD16 824 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 HELQQ8TDG4 1101 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 CCDC136Q96JN2 1154 aa20.79■□□□□ 0.92
CCDC43-204ENST00000588687 PLXNA3P51805 1871 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 IGKV6-21A0A0C4DH24 114 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 TMEM150BA6NC51 233 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 CHMP2AO43633 222 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 CSDE1O75534 798 aaKnown RBP20.78■□□□□ 0.92
CCDC43-204ENST00000588687 EOMESO95936 686 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 ZSCAN20P17040 1043 aaPredicted RBP20.78■□□□□ 0.92
CCDC43-204ENST00000588687 RPS6KB1P23443 525 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 SFNP31947 248 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 JAK3P52333 1124 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 FGD1P98174 961 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 ABI1Q8IZP0 508 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 TRAIPQ9BWF2 469 aa20.78■□□□□ 0.92
CCDC43-204ENST00000588687 ZFHX2Q9C0A1 2572 aaPredicted RBP20.77■□□□□ 0.92
CCDC43-204ENST00000588687 M0R2N6 131 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 GAS7O60861 476 aa20.77■□□□□ 0.92
CCDC43-204ENST00000588687 USP11P51784 963 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms