RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 AUTS2Q8WXX7 1259 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 RIN2Q8WYP3 895 aaPredicted RBP9.74□□□□□ -0.85
SDF2-204ENST00000587338 MXRA8Q9BRK3 442 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 IL25Q9H293 177 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 SEMA4AQ9H3S1 761 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 PCDHA6Q9UN73 950 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 DUSP12Q9UNI6 340 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 PCDHA8Q9Y5H6 950 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 CFAP47Q6ZTR5 3102 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 NFASCO94856 1347 aa9.74□□□□□ -0.85
SDF2-204ENST00000587338 hCG_1642624A0A1W2PR95 340 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 C22orf31O95567 290 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 CYP21A2P08686 494 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
SDF2-204ENST00000587338 ALDH7A1P49419 539 aaKnown RBP9.73□□□□□ -0.85
SDF2-204ENST00000587338 PUM1Q14671 1186 aaKnown RBP eCLIP9.73□□□□□ -0.85
SDF2-204ENST00000587338 FAM160B1Q5W0V3 765 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 PDXDC2PQ6P474 469 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 OTOP3Q7RTS5 596 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 TRMT1LQ7Z2T5 733 aaKnown RBP9.73□□□□□ -0.85
SDF2-204ENST00000587338 ECHDC2Q86YB7 292 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 CCDC60Q8IWA6 550 aaPredicted RBP9.73□□□□□ -0.85
SDF2-204ENST00000587338 CKAP2LQ8IYA6 745 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 ZNF654Q8IZM8 581 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 VPS52Q8N1B4 723 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 CMTR1Q8N1G2 835 aaKnown RBP9.73□□□□□ -0.85
SDF2-204ENST00000587338 METTL13Q8N6R0 699 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 NCOA7Q8NI08 942 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 HELQQ8TDG4 1101 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 TMEM169Q96HH4 297 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 CNTNAP3BQ96NU0 1288 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 CNTNAP3Q9BZ76 1288 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 TAF6LQ9Y6J9 622 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 U3KPZ7 1027 aaPredicted RBP9.73□□□□□ -0.85
SDF2-204ENST00000587338 COL1A2P08123 1366 aa9.73□□□□□ -0.85
SDF2-204ENST00000587338 ZBTB42B2RXF5 422 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 E7EWF7 191 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 NARSO43776 548 aaKnown RBP9.72□□□□□ -0.85
SDF2-204ENST00000587338 ZC3H11AO75152 810 aaKnown RBP eCLIP9.72□□□□□ -0.85
SDF2-204ENST00000587338 GPR32O75388 356 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 DDAH1O94760 285 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 CCNE2O96020 404 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 CFHP08603 1231 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 CLCN3P51790 818 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 BCAR1P56945 870 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 ANTXR2P58335 489 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 ZNF484Q5JVG2 852 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 HEATR3Q7Z4Q2 680 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 SRBD1Q8N5C6 995 aaKnown RBP9.72□□□□□ -0.85
SDF2-204ENST00000587338 PGBD1Q96JS3 809 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 LZTS2Q9BRK4 669 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 MRPL9Q9BYD2 267 aaKnown RBP9.72□□□□□ -0.85
SDF2-204ENST00000587338 ZBP1Q9H171 429 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 OSBPL3Q9H4L5 887 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 SFXN1Q9H9B4 322 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 KCNK12Q9HB15 430 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 AGO4Q9HCK5 861 aaKnown RBP9.72□□□□□ -0.85
SDF2-204ENST00000587338 ZNF302Q9NR11 478 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 MAP1BP46821 2468 aaKnown RBP9.72□□□□□ -0.85
SDF2-204ENST00000587338 EVPLQ92817 2033 aa9.72□□□□□ -0.85
SDF2-204ENST00000587338 DENND4AQ7Z401 1863 aa9.71□□□□□ -0.85
SDF2-204ENST00000587338 IGKV6D-21A0A0A0MT36 114 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 ATG7O95352 703 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 RXRAP19793 462 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 SMARCA1P28370 1054 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 GNAQP50148 359 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 CEP55Q53EZ4 464 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 SPECC1Q5M775 1068 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 TTC22Q5TAA0 569 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 SWSAP1Q6NVH7 229 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 ZC3H14Q6PJT7 736 aaKnown RBP9.71□□□□□ -0.86
SDF2-204ENST00000587338 ABHD15Q6UXT9 468 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 NFXL1Q6ZNB6 911 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 GPR149Q86SP6 731 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 TMEM173Q86WV6 379 aaPredicted RBP9.71□□□□□ -0.86
SDF2-204ENST00000587338 RAB11FIP4Q86YS3 637 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 CCDC82Q8N4S0 544 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 DCLK2Q8N568 766 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 IGDCC4Q8TDY8 1250 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 SLC22A17Q8WUG5 538 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 RUBCNQ92622 972 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 ZNF668Q96K58 619 aaPredicted RBP9.71□□□□□ -0.86
SDF2-204ENST00000587338 SCLT1Q96NL6 688 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 MAP7D2Q96T17 732 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 MAP3K14Q99558 947 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 LY9Q9HBG7 655 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 CA14Q9ULX7 337 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 AKT3Q9Y243 479 aa9.71□□□□□ -0.86
SDF2-204ENST00000587338 KRBA1A5PL33 1030 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 CTSAP10619 480 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 GSPT1P15170 499 aaKnown RBP9.7□□□□□ -0.86
SDF2-204ENST00000587338 ATP4AP20648 1035 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 FGFR4P22455 802 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 POLGP54098 1239 aaPredicted RBP9.7□□□□□ -0.86
SDF2-204ENST00000587338 NLRP11P59045 1033 aaKnown RBP9.7□□□□□ -0.86
SDF2-204ENST00000587338 PTH1RQ03431 593 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 GIT2Q14161 759 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 LETM2Q2VYF4 491 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 MIS18BP1Q6P0N0 1132 aa9.7□□□□□ -0.86
SDF2-204ENST00000587338 PPFIBP1Q86W92 1011 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms