RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 MTERF2Q49AM1 385 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 PLPP4Q5VZY2 271 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 SMRP1Q8NCR6 262 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 PPP2R3CQ969Q6 453 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 SCLT1Q96NL6 688 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 CASD1Q96PB1 797 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 TLE6Q9H808 572 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 SEPT9Q9UHD8 586 aaPredicted RBP17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 PCDHA4Q9UN74 947 aa17.14■□□□□ 0.33
PRKCSH-204ENST00000587290 PSMD10O75832 226 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 USP11P51784 963 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 TBC1D8BQ0IIM8 1120 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 CLLU1OSQ5K130 101 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 ODR4Q5SWX8 454 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 ECHDC2Q86YB7 292 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 RNF135Q8IUD6 432 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 RIT2Q99578 217 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 SH3GLB2Q9NR46 395 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 KCNJ14Q9UNX9 436 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 CYP46A1Q9Y6A2 500 aa17.13■□□□□ 0.33
PRKCSH-204ENST00000587290 ARID2Q68CP9 1835 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 M0R2N6 131 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 SLC37A4O43826 429 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 EYA4O95677 639 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 DARSP14868 501 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 EIF4BP23588 611 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 TMOD1P28289 359 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 JAK3P52333 1124 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 TARBP2Q15633 366 aaKnown RBP17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 LONRF3Q496Y0 759 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 MIER3Q7Z3K6 550 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 BLIDQ8IZY5 108 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 NLRP7Q8WX94 980 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 APOL5Q9BWW9 433 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 TMEM117Q9H0C3 514 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 AAASQ9NRG9 546 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 NRBP2Q9NSY0 501 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 GJB4Q9NTQ9 266 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 CDH22Q9UJ99 828 aa17.12■□□□□ 0.33
PRKCSH-204ENST00000587290 HIDE1A8MVS5 230 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 CPLX1O14810 134 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 FSCN2O14926 492 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 STBD1O95210 358 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 DEXIO95424 95 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 ATF7P17544 494 aaPredicted RBP17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 LAG3P18627 525 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 SFNP31947 248 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 UBE3AQ05086 875 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 COASYQ13057 564 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 INF2Q27J81 1249 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 Q4G0T1 1027 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 PLA2G4FQ68DD2 849 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 LLGL2Q6P1M3 1020 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 KCNT2Q6UVM3 1135 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 HFE2Q6ZVN8 426 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 ETNPPLQ8TBG4 499 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 HELQQ8TDG4 1101 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 CEP89Q96ST8 783 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 POP1Q99575 1024 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 TCF25Q9BQ70 676 aa17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 ELAC1Q9H777 363 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-204ENST00000587290 ZSCAN20P17040 1043 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 DUSP6Q16828 381 aa17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 B3GNT9Q6UX72 402 aa17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 KSR1Q8IVT5 923 aa17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 ABI1Q8IZP0 508 aa17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 LRRC43Q8N309 656 aa17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 ENTPD7Q9NQZ7 604 aa17.1■□□□□ 0.33
PRKCSH-204ENST00000587290 CYP3A7-CYP3A51PA0A087WV96 503 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 A0A087WZ62 844 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 EML1O00423 815 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 SP100P23497 879 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 CYP3A7P24462 503 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 LETM2Q2VYF4 491 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 DAGLBQ8NCG7 672 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 MRPS27Q92552 414 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 LPPQ93052 612 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 ZNF274Q96GC6 653 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 RPGRIP1Q96KN7 1286 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 ZNF558Q96NG5 402 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 FDXACB1Q9BRP7 624 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 PDRG1Q9NUG6 133 aa17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 DDX25Q9UHL0 483 aaKnown RBP17.09■□□□□ 0.33
PRKCSH-204ENST00000587290 MEIS3P2A8K0S8 358 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 DDX11L8A8MPP1 907 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 SCRN1Q12765 414 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 NONOQ15233 471 aaKnown RBP eCLIP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 XKR3Q5GH77 459 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 ANO5Q75V66 913 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 TMEM173Q86WV6 379 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 RHPN2Q8IUC4 686 aa17.08■□□□□ 0.32
PRKCSH-204ENST00000587290 ZNF579Q8NAF0 562 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms