RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 HIP1RO75146 1068 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 RSPH10BP0C881 870 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 IDEP14735 1019 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 KLRC1P26715 233 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 ZNF131P52739 623 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 ZNF200P98182 395 aaPredicted RBP16.52■□□□□ 0.24
NFIX-208ENST00000587260 MARCH8Q5T0T0 291 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 FAM102BQ5T8I3 360 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 ISM2Q6H9L7 571 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 MTHFD1LQ6UB35 978 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 METTL13Q8N6R0 699 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 SENP6Q9GZR1 1112 aaPredicted RBP16.52■□□□□ 0.24
NFIX-208ENST00000587260 DNAJC25Q9H1X3 360 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 ZHX3Q9H4I2 956 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 DHX33Q9H6R0 707 aaKnown RBP16.52■□□□□ 0.24
NFIX-208ENST00000587260 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 EXOC1Q9NV70 894 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 PANK4Q9NVE7 773 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 GTF2IRD1Q9UHL9 959 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
NFIX-208ENST00000587260 A0A0U1RQG5 324 aaPredicted RBP16.51■□□□□ 0.23
NFIX-208ENST00000587260 TBCAO75347 108 aaKnown RBP16.51■□□□□ 0.23
NFIX-208ENST00000587260 MAFO75444 373 aaPredicted RBP16.51■□□□□ 0.23
NFIX-208ENST00000587260 CAPN15O75808 1086 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 ZNF165P49910 485 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 CLCN3P51790 818 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 COASYQ13057 564 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 DRP2Q13474 957 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 GDF6Q6KF10 455 aaPredicted RBP16.51■□□□□ 0.23
NFIX-208ENST00000587260 NFRKBQ6P4R8 1299 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 C11orf57Q6ZUT1 292 aaPredicted RBP16.51■□□□□ 0.23
NFIX-208ENST00000587260 FAM200AQ8TCP9 573 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 TMEM143Q96AN5 459 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 RBSNQ9H1K0 784 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 PCDHA2Q9Y5H9 948 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 COL4A3BPQ9Y5P4 624 aa16.51■□□□□ 0.23
NFIX-208ENST00000587260 KIAA0100Q14667 2235 aaKnown RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 RRN3P2A6NIE6 340 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 PPP1R3GB7ZBB8 358 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 TREHO43280 583 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 GAP43P17677 238 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 PPP1R2P41236 205 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 ATN1P54259 1190 aaPredicted RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 STK4Q13043 487 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 MAPK7Q13164 816 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 EFCAB12Q6NXP0 572 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 MCPH1Q8NEM0 835 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 POLR3FQ9H1D9 316 aaPredicted RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 SEL1LQ9UBV2 794 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 GOLGA6L3A6NEY3 463 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 SFI1A8K8P3 1242 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 FAM13AO94988 1023 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 CYP2C9P11712 490 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 ERCC5P28715 1186 aaPredicted RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 HOXC8P31273 242 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 RUFY4Q6ZNE9 571 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 EXOC8Q8IYI6 725 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 DAW1Q8N136 415 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 ANKLE1Q8NAG6 615 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 RETREG2Q8NC44 543 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 FAM49AQ9H0Q0 323 aaPredicted RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 OLFML3Q9NRN5 406 aa16.5■□□□□ 0.23
NFIX-208ENST00000587260 TRMT13Q9NUP7 481 aaKnown RBP16.5■□□□□ 0.23
NFIX-208ENST00000587260 IGKV6-21A0A0C4DH24 114 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 MBLAC1A4D2B0 266 aaPredicted RBP16.49■□□□□ 0.23
NFIX-208ENST00000587260 MAGEB2O15479 319 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 GNAT1P11488 350 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
NFIX-208ENST00000587260 RTP1P59025 263 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 MKRN4PQ13434 485 aaPredicted RBP16.49■□□□□ 0.23
NFIX-208ENST00000587260 IQCB1Q15051 598 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 FAM26FQ5R3K3 315 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 SESTD1Q86VW0 696 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 ADSSL1Q8N142 457 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 KIAA0895Q8NCT3 520 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 ABHD8Q96I13 439 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 PAWRQ96IZ0 340 aaKnown RBP16.49■□□□□ 0.23
NFIX-208ENST00000587260 DRC1Q96MC2 740 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 PPP1R16BQ96T49 567 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 JPH2Q9BR39 696 aaPredicted RBP16.49■□□□□ 0.23
NFIX-208ENST00000587260 C11orf49Q9H6J7 331 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 C17orf75Q9HAS0 396 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 PARVGQ9HBI0 331 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 CBX8Q9HC52 389 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 GDAQ9Y2T3 454 aa16.49■□□□□ 0.23
NFIX-208ENST00000587260 ARVCFO00192 962 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 MAPTP10636 758 aaKnown RBP16.48■□□□□ 0.23
NFIX-208ENST00000587260 COL6A1P12109 1028 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 CD44P16070 742 aaKnown RBP16.48■□□□□ 0.23
NFIX-208ENST00000587260 PRCPP42785 496 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 ADAM17P78536 824 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 PTGISQ16647 500 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 SFR1Q86XK3 245 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 ASAP3Q8TDY4 903 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 BSNDQ8WZ55 320 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 TBC1D7Q9P0N9 293 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 NOD1Q9Y239 953 aa16.48■□□□□ 0.23
NFIX-208ENST00000587260 AKT3Q9Y243 479 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms