RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CD52P31358 61 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 TMEM62Q0P6H9 643 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 SF3A1Q15459 793 aaKnown RBP15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 FOXD4L5Q5VV16 416 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 FOXD4L4Q8WXT5 416 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 TOP1MTQ969P6 601 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 ZNF396Q96N95 335 aaPredicted RBP15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 SAMD11Q96NU1 681 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 RAD9AQ99638 391 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 OSMRQ99650 979 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 SLC28A3Q9HAS3 691 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 CHST12Q9NRB3 414 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 DACT1Q9NYF0 836 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 KCNG1Q9UIX4 513 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 DNM3Q9UQ16 869 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
PRKCSH-202ENST00000585540 ZSCAN20P17040 1043 aaPredicted RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 ANP32AP39687 249 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 NFX1Q12986 1120 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 FAM173BQ6P4H8 233 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 FAM228AQ86W67 206 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 IFNLR1Q8IU57 520 aaPredicted RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 RHPN2Q8IUC4 686 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 NPAS4Q8IUM7 802 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 MYOCDQ8IZQ8 938 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 ZBTB10Q96DT7 871 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 CALML4Q96GE6 196 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 CDK5RAP3Q96JB5 506 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 ZBED2Q9BTP6 218 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 ELAC1Q9H777 363 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 AGO3Q9H9G7 860 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 ST3GAL5Q9UNP4 418 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 NOC2LQ9Y3T9 749 aaKnown RBP15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 RWDD3Q9Y3V2 267 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 MYH15Q9Y2K3 1946 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 TTC3P53804 2025 aa15.36■□□□□ 0.05
PRKCSH-202ENST00000585540 PTPRSQ13332 1948 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 TMEM150BA6NC51 233 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 VWA3AA6NCI4 1184 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 HOXA2O43364 376 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 EYA4O95677 639 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 ZSCAN22P10073 491 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 SKIP12755 728 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 TXLNAP40222 546 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 UBA7P41226 1012 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 PHKA2P46019 1235 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 NASPP49321 788 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 SARSP49591 514 aaKnown RBP15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 DEFB103AP81534 67 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 HTRA4P83105 476 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 PPP2R5AQ15172 486 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 POTEGQ6S5H5 508 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 SLC24A5Q71RS6 500 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 SP7Q8TDD2 431 aaPredicted RBP15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 TMEM40Q8WWA1 233 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 KIFAP3Q92845 792 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 TRAIPQ9BWF2 469 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 ZNF576Q9H609 170 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 C17orf75Q9HAS0 396 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 TSHZ2Q9NRE2 1034 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 RGS18Q9NS28 235 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 GBF1Q92538 1859 aa15.35■□□□□ 0.05
PRKCSH-202ENST00000585540 DENND3A2RUS2 1198 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 CARNS1A5YM72 827 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 ENPP3O14638 875 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 YEATS4O95619 227 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 F13A1P00488 732 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 CYP11B2P19099 503 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 AXLP30530 894 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 ARL2P36404 184 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 RAB27AP51159 221 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 PTPAQ15257 358 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 PPP2R2DQ66LE6 453 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 DEFB123Q8N688 67 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 PIGOQ8TEQ8 1089 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 NLRP4Q96MN2 994 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 CCSER1Q9C0I3 900 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 C2orf40Q9H1Z8 148 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 XPNPEP1Q9NQW7 623 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 DDX19AQ9NUU7 478 aaKnown RBP15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 KIAA1024Q9UPX6 916 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 ATP6V1DQ9Y5K8 247 aa15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 SRPRBQ9Y5M8 271 aaKnown RBP15.34■□□□□ 0.05
PRKCSH-202ENST00000585540 A0A087WZ62 844 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 USO1O60763 962 aaKnown RBP15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 PPP6R2O75170 966 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 SCP2P22307 547 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 NCBP1Q09161 790 aaKnown RBP15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 LAMTOR4Q0VGL1 99 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 DRP2Q13474 957 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 SLC39A14Q15043 492 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 TCTN1Q2MV58 587 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 PADI6Q6TGC4 694 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 CABP7Q86V35 215 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 DRC1Q96MC2 740 aa15.33■□□□□ 0.04
PRKCSH-202ENST00000585540 YME1L1Q96TA2 773 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms