RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 EIF2AK1Q9BQI3 630 aaKnown RBP9.66□□□□□ -0.86
ATG4D-202ENST00000585437 SH2D3AQ9BRG2 576 aa9.66□□□□□ -0.86
ATG4D-202ENST00000585437 ZSWIM4Q9H7M6 989 aa9.66□□□□□ -0.86
ATG4D-202ENST00000585437 GAS2O43903 313 aaKnown RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 MARCH6O60337 910 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 LPXNO60711 386 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 DGKIO75912 1065 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 SPATA31C1P0DKV0 1188 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 DARSP14868 501 aaKnown RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 EIF4BP23588 611 aaKnown RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 RFC5P40937 340 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 FXR2P51116 673 aaKnown RBP eCLIP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 NPEPPSP55786 919 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 CTTNQ14247 550 aaKnown RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 TMEM266Q2M3C6 531 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 ODR4Q5SWX8 454 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 ZNF410Q86VK4 478 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 IGSF22Q8N9C0 903 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 MAFAQ8NHW3 353 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 GAS2L1Q99501 681 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 JPH2Q9BR39 696 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 ZBED2Q9BTP6 218 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 XPNPEP1Q9NQW7 623 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 RGS18Q9NS28 235 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 FOXD4L1Q9NU39 408 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 NOL7Q9UMY1 257 aaKnown RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 ST3GAL5Q9UNP4 418 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 AKT3Q9Y243 479 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.65□□□□□ -0.86
ATG4D-202ENST00000585437 PCDHB6Q9Y5E3 794 aa9.65□□□□□ -0.86
ATG4D-202ENST00000585437 C9IYK1 514 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 LAD1O00515 517 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 ZBTB39O15060 712 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 GPR182O15218 404 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 ATP2B1P20020 1258 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 MUTP22033 750 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 PRPHP41219 470 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 SARSP49591 514 aaKnown RBP9.64□□□□□ -0.87
ATG4D-202ENST00000585437 RARRES1P49788 294 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 CDC42EP1Q00587 391 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 GNL2Q13823 731 aaKnown RBP9.64□□□□□ -0.87
ATG4D-202ENST00000585437 EMC2Q15006 297 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 ZNF174Q15697 407 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 RILPL1Q5EBL4 403 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 FAM117BQ6P1L5 589 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 OTUD6AQ7L8S5 288 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 NPAS4Q8IUM7 802 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 EXOC8Q8IYI6 725 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 SLC7A3Q8WY07 619 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 CLP1Q92989 425 aaKnown RBP9.64□□□□□ -0.87
ATG4D-202ENST00000585437 SAMD11Q96NU1 681 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 TGS1Q96RS0 853 aaKnown RBP9.64□□□□□ -0.87
ATG4D-202ENST00000585437 PPP1R16BQ96T49 567 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 POLR3CQ9BUI4 534 aaPredicted RBP9.64□□□□□ -0.87
ATG4D-202ENST00000585437 SUGCTQ9HAC7 445 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 IFT122Q9HBG6 1241 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 TUFT1Q9NNX1 390 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 C1orf112Q9NSG2 853 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 ANKEF1Q9NU02 776 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 SMC3Q9UQE7 1217 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 GINS2Q9Y248 185 aa9.64□□□□□ -0.87
ATG4D-202ENST00000585437 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
ATG4D-202ENST00000585437 C5orf67F2Z3F1 127 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 MED24O75448 989 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 UPP2O95045 317 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 RPA1P27694 616 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 TECP42680 631 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 DNM2P50570 870 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 POLGP54098 1239 aaPredicted RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 FAM189BP81408 668 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 ATP2C1P98194 919 aaPredicted RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 NFX1Q12986 1120 aaKnown RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 PTGDRQ13258 359 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 GRB10Q13322 594 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 XKR9Q5GH70 373 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 SLC24A5Q71RS6 500 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 CATSPER3Q86XQ3 398 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 TPH2Q8IWU9 490 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 CMTR2Q8IYT2 770 aaKnown RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 CEP170P1Q96L14 293 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 YME1L1Q96TA2 773 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 ADAM2Q99965 735 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 C17orf80Q9BSJ5 609 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 TRAIPQ9BWF2 469 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 ELAC1Q9H777 363 aaKnown RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 CERS4Q9HA82 394 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 SUCLA2Q9P2R7 463 aaPredicted RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 DBR1Q9UK59 544 aaKnown RBP9.63□□□□□ -0.87
ATG4D-202ENST00000585437 COL4A3BPQ9Y5P4 624 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 MTCH2Q9Y6C9 303 aa9.63□□□□□ -0.87
ATG4D-202ENST00000585437 A0A087WZ62 844 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 RFXAPO00287 272 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 TRAK2O60296 914 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 DGAT1O75907 488 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 STAG3L1P0CL83 205 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 PDIA5Q14554 519 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 IL17AQ16552 155 aa9.62□□□□□ -0.87
ATG4D-202ENST00000585437 EPC2Q52LR7 807 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms