RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 NLRP7Q8WX94 980 aa20.22■□□□□ 0.83
SRSF1-208ENST00000584773 HLA-CQ95604 372 aa20.22■□□□□ 0.83
SRSF1-208ENST00000584773 DYDC2Q96IM9 177 aa20.22■□□□□ 0.83
SRSF1-208ENST00000584773 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
SRSF1-208ENST00000584773 LXNQ9BS40 222 aa20.22■□□□□ 0.83
SRSF1-208ENST00000584773 PCDHB7Q9Y5E2 793 aa20.22■□□□□ 0.83
SRSF1-208ENST00000584773 ARID2Q68CP9 1835 aa20.22■□□□□ 0.83
SRSF1-208ENST00000584773 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 BMP1P13497 986 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 DARSP14868 501 aaKnown RBP20.21■□□□□ 0.83
SRSF1-208ENST00000584773 ATP2B1P20020 1258 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 EIF4BP23588 611 aaKnown RBP20.21■□□□□ 0.83
SRSF1-208ENST00000584773 EPHA7Q15375 998 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 TCEAL5Q5H9L2 206 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 SLC24A5Q71RS6 500 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 ALG13Q9NP73 1137 aaKnown RBP20.21■□□□□ 0.83
SRSF1-208ENST00000584773 CYP26B1Q9NR63 512 aa20.21■□□□□ 0.83
SRSF1-208ENST00000584773 PLXNA4Q9HCM2 1894 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 A0A087WZ62 844 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 TBKBP1A7MCY6 615 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 MAFO75444 373 aaPredicted RBP20.2■□□□□ 0.82
SRSF1-208ENST00000584773 P4HBP07237 508 aaKnown RBP20.2■□□□□ 0.82
SRSF1-208ENST00000584773 CALCRLQ16602 461 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 PTPROQ16827 1216 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 ODR4Q5SWX8 454 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 FDXACB1Q9BRP7 624 aaPredicted RBP20.2■□□□□ 0.82
SRSF1-208ENST00000584773 TMEM60Q9H2L4 133 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 C1orf112Q9NSG2 853 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 SUCLA2Q9P2R7 463 aaPredicted RBP20.2■□□□□ 0.82
SRSF1-208ENST00000584773 COG5Q9UP83 839 aa20.2■□□□□ 0.82
SRSF1-208ENST00000584773 DNAJB1P25685 340 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 RBM25P49756 843 aaKnown RBP20.19■□□□□ 0.82
SRSF1-208ENST00000584773 RHPN2Q8IUC4 686 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 SLFN12Q8IYM2 578 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 IL27Q8NEV9 243 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 C8orf76Q96K31 380 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 CEP170P1Q96L14 293 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 UHRF1Q96T88 793 aaPredicted RBP20.19■□□□□ 0.82
SRSF1-208ENST00000584773 C11orf84Q9BUA3 381 aaPredicted RBP20.19■□□□□ 0.82
SRSF1-208ENST00000584773 UBE2ZQ9H832 354 aaPredicted RBP20.19■□□□□ 0.82
SRSF1-208ENST00000584773 RNF19AQ9NV58 838 aa20.19■□□□□ 0.82
SRSF1-208ENST00000584773 NEMFO60524 1076 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 BAG4O95429 457 aaKnown RBP20.18■□□□□ 0.82
SRSF1-208ENST00000584773 ITGB1P05556 798 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 RB1P06400 928 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 TXKP42681 527 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 FAM189BP81408 668 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 CAMK1Q14012 370 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 KLHL23Q8NBE8 558 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 TMEM143Q96AN5 459 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 NLRP4Q96MN2 994 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 EIF2AK1Q9BQI3 630 aaKnown RBP20.18■□□□□ 0.82
SRSF1-208ENST00000584773 RWDD3Q9Y3V2 267 aa20.18■□□□□ 0.82
SRSF1-208ENST00000584773 A0A087WWV3 80 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 SLITRK3O94933 977 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 KCNA5P22460 613 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 YWHABP31946 246 aaKnown RBP20.17■□□□□ 0.82
SRSF1-208ENST00000584773 MCM7P33993 719 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 TIGD5Q53EQ6 642 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 TPH2Q8IWU9 490 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 C4orf19Q8IY42 314 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 RNF169Q8NCN4 708 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 ZSCAN31Q96LW9 406 aaPredicted RBP20.17■□□□□ 0.82
SRSF1-208ENST00000584773 MTMR9Q96QG7 549 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 LLPHQ9BRT6 129 aaKnown RBP20.17■□□□□ 0.82
SRSF1-208ENST00000584773 NSUN3Q9H649 340 aaKnown RBP20.17■□□□□ 0.82
SRSF1-208ENST00000584773 TTC12Q9H892 705 aaPredicted RBP20.17■□□□□ 0.82
SRSF1-208ENST00000584773 ATP6V0A4Q9HBG4 840 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 TMEM161AQ9NX61 479 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 PLAGL2Q9UPG8 496 aa20.17■□□□□ 0.82
SRSF1-208ENST00000584773 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.16■□□□□ 0.82
SRSF1-208ENST00000584773 POTEMA6NI47 508 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 ZSCAN20P17040 1043 aaPredicted RBP20.16■□□□□ 0.82
SRSF1-208ENST00000584773 GTF2F1P35269 517 aaKnown RBP eCLIP20.16■□□□□ 0.822e-7■■■□□ 15.1
SRSF1-208ENST00000584773 IRS1P35568 1242 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 DNM2P50570 870 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 POLGP54098 1239 aaPredicted RBP20.16■□□□□ 0.82
SRSF1-208ENST00000584773 AAK1Q2M2I8 961 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 SPOUT1Q5T280 376 aaKnown RBP20.16■□□□□ 0.82
SRSF1-208ENST00000584773 ECHDC2Q86YB7 292 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 GCOM2Q9BZD3 368 aaPredicted RBP20.16■□□□□ 0.82
SRSF1-208ENST00000584773 DHX33Q9H6R0 707 aaKnown RBP20.16■□□□□ 0.82
SRSF1-208ENST00000584773 PCDHA12Q9UN75 941 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 PCDHGC5Q9Y5F6 944 aa20.16■□□□□ 0.82
SRSF1-208ENST00000584773 TNFRSF10AO00220 468 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 DKC1O60832 514 aaKnown RBP eCLIP20.15■□□□□ 0.82
SRSF1-208ENST00000584773 CD2BP2O95400 341 aaKnown RBP20.15■□□□□ 0.82
SRSF1-208ENST00000584773 ATF7P17544 494 aaPredicted RBP20.15■□□□□ 0.82
SRSF1-208ENST00000584773 NBR1Q14596 966 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 SAFBQ15424 915 aaKnown RBP eCLIP20.15■□□□□ 0.82
SRSF1-208ENST00000584773 ZNF174Q15697 407 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 XKR9Q5GH70 373 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 EP400NLQ6ZTU2 488 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 SPPL3Q8TCT6 385 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 PLVAPQ9BX97 442 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 ZSWIM4Q9H7M6 989 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
SRSF1-208ENST00000584773 TYW1Q9NV66 732 aaKnown RBP20.15■□□□□ 0.82
SRSF1-208ENST00000584773 NCOR1O75376 2440 aa20.15■□□□□ 0.82
SRSF1-208ENST00000584773 H3BQ06 376 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms