RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 LUC7L3O95232 432 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 MMEP08473 750 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 EEF2P13639 858 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 ECHS1P30084 290 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 PRELPP51888 382 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 RRP1BQ14684 758 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 TDRD12Q587J7 1177 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 GPATCH4Q5T3I0 446 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 RRAGAQ7L523 313 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 FAM129AQ9BZQ8 928 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 ZCWPW1Q9H0M4 648 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 MMRN2Q9H8L6 949 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 PNMA2Q9UL42 364 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 PNMA6FA0A0J9YX94 578 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 IGF2BP3O00425 579 aaKnown RBP eCLIP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 LAMB3Q13751 1172 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 NONOQ15233 471 aaKnown RBP eCLIP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 ERMARDQ5T6L9 678 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 FAM210AQ96ND0 272 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 PLIN2Q99541 437 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 KANSL2Q9H9L4 492 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 A6NHS1 94 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 LAD1O00515 517 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 LIN7AO14910 233 aaPredicted RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 VIMP08670 466 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 CHN1P15882 459 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 FERP16591 822 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 ATP2A2P16615 1042 aaKnown RBP13.81□□□□□ -0.2
ITGB4-212ENST00000584558 TBC1D25Q3MII6 688 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 PPP1R18Q6NYC8 613 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 COA7Q96BR5 231 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 CD2APQ9Y5K6 639 aa13.81□□□□□ -0.2
ITGB4-212ENST00000584558 DPPA5A6NC42 116 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 RAD17O75943 681 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 UBOX5O94941 541 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 MXRA7P84157 204 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 SEPT2Q15019 361 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 TTI2Q6NXR4 508 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 TMEM179Q6ZVK1 233 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 MFN1Q8IWA4 741 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 LRRC34Q8IZ02 419 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 LARGE2Q8N3Y3 721 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 DRAXINQ8NBI3 349 aaPredicted RBP13.8□□□□□ -0.2
ITGB4-212ENST00000584558 CNTNAP1P78357 1384 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 YBX3P16989 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
ITGB4-212ENST00000584558 CLK2P49760 499 aaKnown RBP13.8□□□□□ -0.2
ITGB4-212ENST00000584558 PTPROQ16827 1216 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 SOGA3Q5TF21 947 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 ZSCAN29Q8IWY8 852 aaPredicted RBP13.8□□□□□ -0.2
ITGB4-212ENST00000584558 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 DUSP9Q99956 384 aaKnown RBP13.8□□□□□ -0.2
ITGB4-212ENST00000584558 ECT2Q9H8V3 914 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 TMEM260Q9NX78 707 aa13.8□□□□□ -0.2
ITGB4-212ENST00000584558 A0A1W2PQJ5 194 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 ALADP13716 330 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 NCALDP61601 193 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 ITIH4Q14624 930 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 MIIPQ5JXC2 388 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 KCTD1Q719H9 257 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 USP38Q8NB14 1042 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 KLHL29Q96CT2 875 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 CNOT10Q9H9A5 744 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 G3BP2Q9UN86 482 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 GRID2IPA4D2P6 1211 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 SMIM23A6NLE4 172 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 USP17L10C9JJH3 530 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 KRT16P08779 473 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 SLC16A2P36021 539 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 TGFB2P61812 414 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 ROR2Q01974 943 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 ORC2Q13416 577 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 MTMR3Q13615 1198 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 CUL1Q13616 776 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 NEK8Q86SG6 692 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 REXO1Q8N1G1 1221 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 MTMR14Q8NCE2 650 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 GMCL1P1Q8NEA9 526 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 INPP4AQ96PE3 977 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 ZNF317Q96PQ6 595 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 PYM1Q9BRP8 204 aaKnown RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 PIDD1Q9HB75 910 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 KCNMB3Q9NPA1 279 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 RIC8AQ9NPQ8 531 aa13.79□□□□□ -0.2
ITGB4-212ENST00000584558 ZNF70Q9UC06 446 aaPredicted RBP13.79□□□□□ -0.2
ITGB4-212ENST00000584558 LRRD1A4D1F6 860 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 SPDYE5A6NIY4 337 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 ZBTB5O15062 677 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 SART1O43290 800 aaKnown RBP13.78□□□□□ -0.2
ITGB4-212ENST00000584558 PDHA1P08559 390 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 RANBP1P43487 201 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 IFNAR2P48551 515 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 ADCY7P51828 1080 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 ABCB5Q2M3G0 1257 aa13.78□□□□□ -0.2
ITGB4-212ENST00000584558 SPDYE2Q495Y8 402 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms