RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 BARHL2Q9NY43 387 aa12.69□□□□□ -0.38
CCDC47-206ENST00000584112 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
CCDC47-206ENST00000584112 NRCAMQ92823 1304 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 RALGAPA1Q6GYQ0 2036 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 TREHO43280 583 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 ATP9AO75110 1047 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 SPINK2P20155 84 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 PSMA5P28066 241 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 AP3B2Q13367 1082 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 HIC1Q14526 733 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 Q6ZUG5 572 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 TRIM50Q86XT4 487 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 SEPT1Q8WYJ6 367 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 BBC3Q96PG8 261 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-206ENST00000584112 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 TMEM121BQ9BXQ6 578 aaPredicted RBP12.68□□□□□ -0.38
CCDC47-206ENST00000584112 ERAP1Q9NZ08 941 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 DLGAP2Q9P1A6 1054 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 SNX14Q9Y5W7 946 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 NID2Q14112 1375 aa12.68□□□□□ -0.38
CCDC47-206ENST00000584112 TTC3P53804 2025 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 SMCO2A6NFE2 343 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 SPTLC1O15269 473 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 EPB41L2O43491 1005 aaKnown RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 NARSO43776 548 aaKnown RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 PPFIA3O75145 1194 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 RFX1P22670 979 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 CDC27P30260 824 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 ARHGAP4P98171 946 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 APOBRQ0VD83 1088 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 DUSP6Q16828 381 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 TYW1BQ6NUM6 668 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 FBXL16Q8N461 479 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 TDRD5Q8NAT2 981 aaKnown RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 CCDC12Q8WUD4 166 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 LMBR1Q8WVP7 490 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 BRF1Q92994 677 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 MXRA8Q9BRK3 442 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 SDF4Q9BRK5 362 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 ANO3Q9BYT9 981 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 SMARCAD1Q9H4L7 1026 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 TBC1D17Q9HA65 648 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 RC3H2Q9HBD1 1191 aaKnown RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 JPH1Q9HDC5 661 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 SETD4Q9NVD3 440 aa12.67□□□□□ -0.38
CCDC47-206ENST00000584112 MRPL42Q9Y6G3 142 aaKnown RBP12.67□□□□□ -0.38
CCDC47-206ENST00000584112 NFASCO94856 1347 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 SCG2P13521 617 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 GLULP15104 373 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 RPS6KB1P23443 525 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 ADD1P35611 737 aaKnown RBP12.66□□□□□ -0.38
CCDC47-206ENST00000584112 SREBF1P36956 1147 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 ADAM17P78536 824 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 AKAP17AQ02040 695 aaKnown RBP12.66□□□□□ -0.38
CCDC47-206ENST00000584112 BTG3Q14201 252 aaPredicted RBP12.66□□□□□ -0.38
CCDC47-206ENST00000584112 CCDC6Q16204 474 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 PFKFB3Q16875 520 aaPredicted RBP12.66□□□□□ -0.38
CCDC47-206ENST00000584112 CEP55Q53EZ4 464 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 ZDHHC14Q8IZN3 488 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 MICAL1Q8TDZ2 1067 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 SEPT8Q92599 483 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 GLG1Q92896 1179 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 TNPO1Q92973 898 aaKnown RBP12.66□□□□□ -0.38
CCDC47-206ENST00000584112 P2RX5Q93086 422 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 AGXT2Q9BYV1 514 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 KCNH7Q9NS40 1196 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 PKD2L1Q9P0L9 805 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 ANKFY1Q9P2R3 1169 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 SLC9A2Q9UBY0 812 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 TELO2Q9Y4R8 837 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 PIEZO2Q9H5I5 2752 aa12.66□□□□□ -0.38
CCDC47-206ENST00000584112 GSTTP1A0A1W2PQM5 241 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 ESYT2A0FGR8 921 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 LRRN2O75325 713 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 RPLP2P05387 115 aaKnown RBP12.65□□□□□ -0.38
CCDC47-206ENST00000584112 CFHP08603 1231 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 CTSHP09668 335 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 CPA1P15085 419 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 ZNF76P36508 570 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 CLK2P49760 499 aaKnown RBP12.65□□□□□ -0.38
CCDC47-206ENST00000584112 PPFIA1Q13136 1202 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 KCNC3Q14003 757 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 LPAL2Q16609 132 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 FAM26DQ5JW98 314 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 LARP1BQ659C4 914 aaKnown RBP12.65□□□□□ -0.38
CCDC47-206ENST00000584112 NIPA1Q7RTP0 329 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 RSPH3Q86UC2 560 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 ZCCHC14Q8WYQ9 949 aaKnown RBP12.65□□□□□ -0.38
CCDC47-206ENST00000584112 APBB2Q92870 758 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 EPC1Q9H2F5 836 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 AZI2Q9H6S1 392 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 C6orf50Q9HD87 102 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 CA14Q9ULX7 337 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 DUSP12Q9UNI6 340 aa12.65□□□□□ -0.38
CCDC47-206ENST00000584112 RRN3P2A6NIE6 340 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 MEIS1O00470 390 aa12.64□□□□□ -0.39
CCDC47-206ENST00000584112 PRPF3O43395 683 aaKnown RBP12.64□□□□□ -0.39
CCDC47-206ENST00000584112 MARK3P27448 753 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms