RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 K7ESF4 209 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 CDK11BP21127 795 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 CD40P25942 277 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 POLD1P28340 1107 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ADCY8P40145 1251 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 RRADP55042 308 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 SESN3P58005 492 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 IL13RA1P78552 427 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ALDH6A1Q02252 535 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 USP10Q14694 798 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 STAT4Q14765 748 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ZNF568Q3ZCX4 644 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ATP13A4Q4VNC1 1196 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ESRP1Q6NXG1 681 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 LRSAM1Q6UWE0 723 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 REXO1L1PQ8IX06 675 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ZNF610Q8N9Z0 462 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 CALML6Q8TD86 181 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 SH3RF3Q8TEJ3 882 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 MAML3Q96JK9 1138 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 PUS7Q96PZ0 661 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 LMF1Q96S06 567 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 FOXB1Q99853 325 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 CARD11Q9BXL7 1154 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 KATNBL1Q9H079 304 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 KLC2Q9H0B6 622 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 PUS7LQ9H0K6 701 aaKnown RBP5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 OR10A5Q9H207 317 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 ZMAT4Q9H898 229 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 CD248Q9HCU0 757 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 SLC4A7Q9Y6M7 1214 aa5.48□□□□□ -1.53
PPP4R1-227ENST00000583988 NEMP1O14524 444 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 MATN3O15232 486 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 MAFO75444 373 aaPredicted RBP5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 TNFRSF1AP19438 455 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 TERF2Q15554 542 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 TTC38Q5R3I4 469 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 KANK2Q63ZY3 851 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 SPRED1Q7Z699 444 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 RASSF3Q86WH2 238 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 GIMAP8Q8ND71 665 aaPredicted RBP5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 DNERQ8NFT8 737 aa5.47□□□□□ -1.53
PPP4R1-227ENST00000583988 PATE3B3GLJ2 98 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 C1QTNF3-AMACRE9PGA6 284 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 CUTAO60888 179 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 ZNF623O75123 536 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 PRLP01236 227 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 APEX1P27695 318 aaKnown RBP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 KCNQ1P51787 676 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 ZXDAP98168 799 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 CD83Q01151 205 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 SLC6A3Q01959 620 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 TOP3AQ13472 1001 aaPredicted RBP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 NOLC1Q14978 699 aaKnown RBP eCLIP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 BROXQ5VW32 411 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 TAX1BP1Q86VP1 789 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 PHYKPLQ8IUZ5 450 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 WDR48Q8TAF3 677 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 RTF1Q92541 710 aaKnown RBP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 SLC5A5Q92911 643 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 ZNF496Q96IT1 587 aaPredicted RBP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 WWC2-AS2Q96NR7 200 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 TUBGCP5Q96RT8 1024 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 CDK5RAP1Q96SZ6 601 aaKnown RBP5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 MENTQ9BUN1 341 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 SEC61A2Q9H9S3 476 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 CDC42EP3Q9UKI2 254 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 TSC22D4Q9Y3Q8 395 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 TCAF1Q9Y4C2 921 aa5.46□□□□□ -1.54
PPP4R1-227ENST00000583988 UBA6A0AVT1 1052 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 MAFGO15525 162 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 HMGCRP04035 888 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 ID4P47928 161 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 RGS3P49796 1198 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 ROM1Q03395 351 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 CDSNQ15517 529 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 TIGD7Q6NT04 549 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 TCTN3Q6NUS6 607 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 FRMD7Q6ZUT3 714 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 OTOP2Q7RTS6 562 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 KANSL1Q7Z3B3 1105 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 Q8TCH9 128 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 NEIL1Q96FI4 390 aaPredicted RBP5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 WNT8AQ9H1J5 351 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 HOMER2Q9NSB8 354 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 SLC5A4Q9NY91 659 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 KCNG1Q9UIX4 513 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 FBXO10Q9UK96 956 aa5.45□□□□□ -1.54
PPP4R1-227ENST00000583988 FOXS1O43638 330 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 RAB11FIP3O75154 756 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 SELENOPP49908 381 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 RAC3P60763 192 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 MOGSQ13724 837 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 EIF4HQ15056 248 aaKnown RBP5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 DDB1Q16531 1140 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 RNF151Q2KHN1 245 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 ZMAT1Q5H9K5 638 aa5.44□□□□□ -1.54
PPP4R1-227ENST00000583988 IQSEC1Q6DN90 963 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms