RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ZNF558Q96NG5 402 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 PCYT2Q99447 389 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 DSCC1Q9BVC3 393 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 TMEM117Q9H0C3 514 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 ELAC1Q9H777 363 aaKnown RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 CDHR5Q9HBB8 845 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 CYP26B1Q9NR63 512 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 SPG21Q9NZD8 308 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 DBR1Q9UK59 544 aaKnown RBP8.72□□□□□ -1.01
CCDC47-205ENST00000582331 ST3GAL5Q9UNP4 418 aa8.72□□□□□ -1.01
CCDC47-205ENST00000582331 FRYLO94915 3013 aa8.71□□□□□ -1.01
CCDC47-205ENST00000582331 C2orf71A6NGG8 1288 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 HOXA2O43364 376 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 CXCL14O95715 111 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 EOMESO95936 686 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 KLRC1P26715 233 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 CA8P35219 290 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 STAT5BP51692 787 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 TDGQ13569 410 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 LRRC55Q6ZSA7 311 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 PLPPR4Q7Z2D5 763 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 ABI1Q8IZP0 508 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 C12orf76Q8N812 135 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-205ENST00000582331 TMEM87AQ8NBN3 555 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 WNT2BQ93097 391 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 ACSF2Q96CM8 615 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-205ENST00000582331 JPH1Q9HDC5 661 aaPredicted RBP8.71□□□□□ -1.02
CCDC47-205ENST00000582331 JADE2Q9NQC1 790 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 DZANK1Q9NVP4 752 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 PLA2G2EQ9NZK7 142 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 SLC9A2Q9UBY0 812 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 FBXL21Q9UKT6 434 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 UBIAD1Q9Y5Z9 338 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 LOXHD1Q8IVV2 1947 aa8.71□□□□□ -1.02
CCDC47-205ENST00000582331 LAMA4Q16363 1823 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 ZNF292O60281 2723 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 ERICH2A1L162 156 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 IFIT3O14879 490 aaKnown RBP8.7□□□□□ -1.02
CCDC47-205ENST00000582331 ARP10275 920 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 PBX3P40426 434 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 CRYBB1P53674 252 aaPredicted RBP8.7□□□□□ -1.02
CCDC47-205ENST00000582331 TROAPQ12815 778 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 TRDNQ13061 729 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 NBR1Q14596 966 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 PROX2Q3B8N5 592 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 KANK3Q6NY19 840 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 OTOP3Q7RTS5 596 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 KIAA0319LQ8IZA0 1049 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 SIX5Q8N196 739 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 LRRC43Q8N309 656 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 TMEM40Q8WWA1 233 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 RRP36Q96EU6 259 aaKnown RBP8.7□□□□□ -1.02
CCDC47-205ENST00000582331 CASD1Q96PB1 797 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 HINFPQ9BQA5 517 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 SDF4Q9BRK5 362 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 DIAPH3Q9NSV4 1193 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 DUSP12Q9UNI6 340 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 R4GN57 208 aa8.7□□□□□ -1.02
CCDC47-205ENST00000582331 HIP1O00291 1037 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 HBP1O60381 514 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 SLC26A2P50443 739 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 ACTR2P61160 394 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 DSC3Q14574 896 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 WTAPQ15007 396 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 CATIPQ7Z7H3 387 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 FAM228AQ86W67 206 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 SLC39A11Q8N1S5 342 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 CYP2W1Q8TAV3 490 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 RUBCNQ92622 972 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 CNTNAP3BQ96NU0 1288 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 CNTNAP3Q9BZ76 1288 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 PSTPIP2Q9H939 334 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 RNF19AQ9NV58 838 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 DLL3Q9NYJ7 618 aa8.69□□□□□ -1.02
CCDC47-205ENST00000582331 SEC63Q9UGP8 760 aaKnown RBP8.69□□□□□ -1.02
CCDC47-205ENST00000582331 BAZ2BQ9UIF8 2168 aaKnown RBP8.69□□□□□ -1.02
CCDC47-205ENST00000582331 GVINP1Q7Z2Y8 2422 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 SPDYE3A6NKU9 549 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ATG7O95352 703 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 EPCAMP16422 314 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ZSCAN20P17040 1043 aaPredicted RBP8.68□□□□□ -1.02
CCDC47-205ENST00000582331 RFX1P22670 979 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 SMARCA1P28370 1054 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ALDH7A1P49419 539 aaKnown RBP8.68□□□□□ -1.02
CCDC47-205ENST00000582331 METAP2P50579 478 aaKnown RBP eCLIP8.68□□□□□ -1.02
CCDC47-205ENST00000582331 GIT2Q14161 759 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 SART3Q15020 963 aaKnown RBP8.68□□□□□ -1.02
CCDC47-205ENST00000582331 KIZQ2M2Z5 673 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ZNF484Q5JVG2 852 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ZC3H14Q6PJT7 736 aaKnown RBP8.68□□□□□ -1.02
CCDC47-205ENST00000582331 TMC5Q6UXY8 1006 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 CCDC149Q6ZUS6 474 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 GPR149Q86SP6 731 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 CABP7Q86V35 215 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 ECHDC2Q86YB7 292 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 VPS52Q8N1B4 723 aa8.68□□□□□ -1.02
CCDC47-205ENST00000582331 RNF169Q8NCN4 708 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms