RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	NLRP7	Q8WX94	980 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SLC5A5	Q92911	643 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CASD1	Q96PB1	797 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	POP1	Q99575	1024 aa	Known RBP	13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	NRBP2	Q9NSY0	501 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RNF19A	Q9NV58	838 aa		13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.12	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ZSCAN20	P17040	1043 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LAG3	P18627	525 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	EIF4B	P23588	611 aa	Known RBP	13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	GPC3	P51654	580 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	USP11	P51784	963 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	JAK3	P52333	1124 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	FAM189B	P81408	668 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LLGL2	Q6P1M3	1020 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ECHDC2	Q86YB7	292 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RNF135	Q8IUD6	432 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SMRP1	Q8NCR6	262 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	VN1R2	Q8NFZ6	395 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RIT2	Q99578	217 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	APOL5	Q9BWW9	433 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TMEM117	Q9H0C3	514 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ZSWIM6	Q9HCJ5	1215 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SH3GLB2	Q9NR46	395 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RNF216	Q9NWF9	866 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	PCDHA4	Q9UN74	947 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	USP15	Q9Y4E8	981 aa	Predicted RBP	13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CYP46A1	Q9Y6A2	500 aa		13.11	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	PSMD10	O75832	226 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	EYA4	O95677	639 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DARS	P14868	501 aa	Known RBP	13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SFN	P31947	248 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	EVC	P57679	992 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	UBE3A	Q05086	875 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	COASY	Q13057	564 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LONRF3	Q496Y0	759 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CLLU1OS	Q5K130	101 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ABI1	Q8IZP0	508 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	BLID	Q8IZY5	108 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	HELQ	Q8TDG4	1101 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TCF25	Q9BQ70	676 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ELAC1	Q9H777	363 aa	Known RBP	13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ENTPD7	Q9NQZ7	604 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	KCNJ14	Q9UNX9	436 aa		13.1	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DDX11L8	A8MPP1	907 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	FSCN2	O14926	492 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	SLC37A4	O43826	429 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DEXI	O95424	95 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	CA8	P35219	290 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	NPY5R	Q15761	445 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	DUSP6	Q16828	381 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	INF2	Q27J81	1249 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114		Q4G0T1	1027 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	PLA2G4F	Q68DD2	849 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	KCNT2	Q6UVM3	1135 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	HFE2	Q6ZVN8	426 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	LRRC43	Q8N309	656 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	MRPS27	Q92552	414 aa	Known RBP	13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	RPGRIP1	Q96KN7	1286 aa		13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.09	□□□□□ -0.31
CDK5RAP3-223	ENST00000582114	TRIO	O75962	3097 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114		A0A087WZ62	844 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	HIDE1	A8MVS5	230 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	NT5C1B-RDH14	C9J2C7	533 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114		M0R2N6	131 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	HOXA2	O43364	376 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	ATF7	P17544	494 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	SP100	P23497	879 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	HOXD11	P31277	338 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	TEC	P42680	631 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	NONO	Q15233	471 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	TARBP2	Q15633	366 aa	Known RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	LETM2	Q2VYF4	491 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	XKR3	Q5GH77	459 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	TMC7	Q7Z402	723 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	KSR1	Q8IVT5	923 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	ETNPPL	Q8TBG4	499 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	ZNF274	Q96GC6	653 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	ZNF558	Q96NG5	402 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	PDRG1	Q9NUG6	133 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	DDX25	Q9UHL0	483 aa	Known RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	PUF60	Q9UHX1	559 aa	Known RBP	13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	WDFY4	Q6ZS81	3184 aa		13.08	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	EML1	O00423	815 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	STBD1	O95210	358 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	CYP3A7	P24462	503 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	SCRN1	Q12765	414 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	CPLX2	Q6PUV4	134 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	RHPN2	Q8IUC4	686 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	DAGLB	Q8NCG7	672 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	RDM1	Q8NG50	284 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	LPP	Q93052	612 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	NLRP4	Q96MN2	994 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	CEP89	Q96ST8	783 aa		13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	CDCA3	Q99618	268 aa	Predicted RBP	13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	NIFK	Q9BYG3	293 aa	Known RBP	13.07	□□□□□ -0.32
CDK5RAP3-223	ENST00000582114	GCOM2	Q9BZD3	368 aa	Predicted RBP	13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms