RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 MARCH6O60337 910 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 DKC1O60832 514 aaKnown RBP eCLIP13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 DARSP14868 501 aaKnown RBP13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 IGFBP4P22692 258 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 GJB2P29033 226 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 CUL4AQ13619 759 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 NBR1Q14596 966 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 TTC38Q5R3I4 469 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 TPH2Q8IWU9 490 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 PPME1Q9Y570 386 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 GTF3C3Q9Y5Q9 886 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 KIAA1671Q9BY89 1806 aa13.87□□□□□ -0.19
SMARCD2-209ENST00000581832 SARSP49591 514 aaKnown RBP13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 EPC2Q52LR7 807 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 KSR1Q8IVT5 923 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 NEK9Q8TD19 979 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 GDPD5Q8WTR4 605 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 CLP1Q92989 425 aaKnown RBP13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 CEP170P1Q96L14 293 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 ADAM2Q99965 735 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 XPNPEP1Q9NQW7 623 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 PRDM6Q9NQX0 595 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 SUCLA2Q9P2R7 463 aaPredicted RBP13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 PCDHB6Q9Y5E3 794 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 ADGRA3Q8IWK6 1321 aa13.86□□□□□ -0.19
SMARCD2-209ENST00000581832 A0A087WZ62 844 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 C5orf67F2Z3F1 127 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 MED24O75448 989 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 CSDE1O75534 798 aaKnown RBP13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 OR52Z1P0C646 297 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 FGFR4P22455 802 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 TECP42680 631 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 CDC42EP1Q00587 391 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 ODR4Q5SWX8 454 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 OTUD6AQ7L8S5 288 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 ZNF410Q86VK4 478 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 CATSPER3Q86XQ3 398 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 TMEM192Q8IY95 271 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 JPH2Q9BR39 696 aaPredicted RBP13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 FDXACB1Q9BRP7 624 aaPredicted RBP13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 C1orf112Q9NSG2 853 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 ANKEF1Q9NU02 776 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 LMCD1Q9NZU5 365 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
SMARCD2-209ENST00000581832 A0A087WWV3 80 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 H3BNC9 293 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 XRCC6P12956 609 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 RFC5P40937 340 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 RARRES1P49788 294 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 GATMP50440 423 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 DNM2P50570 870 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 FXR2P51116 673 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 PTGDRQ13258 359 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 CCDC85BQ15834 202 aaPredicted RBP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 IL17AQ16552 155 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 ECM1Q16610 540 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 XKR9Q5GH70 373 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 RHPN2Q8IUC4 686 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 CMTR2Q8IYT2 770 aaKnown RBP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 FIBCD1Q8N539 461 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 FBXO22Q8NEZ5 403 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 TMEM143Q96AN5 459 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 SAMD11Q96NU1 681 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 POLR3CQ9BUI4 534 aaPredicted RBP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 ELAC1Q9H777 363 aaKnown RBP13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 RNF19AQ9NV58 838 aa13.84□□□□□ -0.19
SMARCD2-209ENST00000581832 DENND3A2RUS2 1198 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 GAS2O43903 313 aaKnown RBP13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 STAG3L1P0CL83 205 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 RPA1P27694 616 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 BMPR1AP36894 532 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 LAMTOR4Q0VGL1 99 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 EMC2Q15006 297 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 EXOC8Q8IYI6 725 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 IGSF22Q8N9C0 903 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 PIGOQ8TEQ8 1089 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 SLC7A3Q8WY07 619 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 PPM1EQ8WY54 764 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 TRAIPQ9BWF2 469 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 GCOM2Q9BZD3 368 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 MINDY3Q9H8M7 445 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 TUFT1Q9NNX1 390 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 KIF3AQ9Y496 699 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 COL4A3BPQ9Y5P4 624 aa13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 MRPL42Q9Y6G3 142 aaKnown RBP13.83□□□□□ -0.2
SMARCD2-209ENST00000581832 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 GNL2Q13823 731 aaKnown RBP13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 BTG3Q14201 252 aaPredicted RBP13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 PDIA5Q14554 519 aa13.82□□□□□ -0.2
SMARCD2-209ENST00000581832 ZNF598Q86UK7 904 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms