RNA–Protein interactions for RNA: ENST00000581729.1

CTC1-209, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS ALT2 TSL 3

Gene CTC1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-209ENST00000581729 SHISA7A6NL88 538 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 PRR5-ARHGAP8B1AHC4 643 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 B4DLN1 442 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 SPATA31C2B4DYI2 1134 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 NOP56O00567 594 aaKnown RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 LILRB5O75023 590 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 PROS1P07225 676 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 STAG3L1P0CL83 205 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 SRGAP2BP0DMP2 458 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 HSPD1P10809 573 aaKnown RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 TDGF1P13385 188 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 GNAT2P19087 354 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 CD72P21854 359 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 CA8P35219 290 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 TCF7P36402 384 aaPredicted RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 MRPL12P52815 198 aaKnown RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 FOSBP53539 338 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 HAND2P61296 217 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ARHGAP8P85298 464 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 CSTF1Q05048 431 aaKnown RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 PAK2Q13177 524 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 PROX2Q3B8N5 592 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 CLLU1OSQ5K130 101 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ATAT1Q5SQI0 421 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ZMYM1Q5SVZ6 1142 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 TAF2Q6P1X5 1199 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 CCDC149Q6ZUS6 474 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 GPR149Q86SP6 731 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 FCHSD1Q86WN1 690 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 TBC1D10CQ8IV04 446 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 STAG2Q8N3U4 1231 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ZBTB44Q8NCP5 570 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 OTUD7AQ8TE49 926 aaPredicted RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 NELL1Q92832 810 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ZDHHC16Q969W1 377 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 INPP4AQ96PE3 977 aaPredicted RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 ADAM2Q99965 735 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 USP26Q9BXU7 913 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ZBP1Q9H171 429 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 NGRNQ9NPE2 291 aaKnown RBP4.8□□□□□ -1.64
CTC1-209ENST00000581729 ANAPC4Q9UJX5 808 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 ANGPTL2Q9UKU9 493 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 LRFN2Q9ULH4 789 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 LZTS1Q9Y250 596 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 SIT1Q9Y3P8 196 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 PCDHB7Q9Y5E2 793 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 TRPV2Q9Y5S1 764 aa4.8□□□□□ -1.64
CTC1-209ENST00000581729 LAMA4Q16363 1823 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 PATJQ8NI35 1801 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 CFAP46Q8IYW2 2715 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 PPP1R3GB7ZBB8 358 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 GNAT1P11488 350 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 SRFP11831 508 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 INSRRP14616 1297 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 LAG3P18627 525 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 METAP2P50579 478 aaKnown RBP eCLIP4.79□□□□□ -1.64
CTC1-209ENST00000581729 SHC2P98077 582 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 RING1Q06587 406 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 DMWDQ09019 674 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 SRSF5Q13243 272 aaKnown RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 DSC3Q14574 896 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 SMC1AQ14683 1233 aaKnown RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 PLCB4Q15147 1175 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 LETM2Q2VYF4 491 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 PDE12Q6L8Q7 609 aaKnown RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 PHLDB3Q6NSJ2 640 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 FAM228AQ86W67 206 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 MCF2L2Q86YR7 1114 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 KRTAP1-3Q8IUG1 177 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 FTSJ3Q8IY81 847 aaKnown RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 SPOCK2Q92563 424 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 MAP4K1Q92918 833 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 TMUB1Q9BVT8 246 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 FTHL17Q9BXU8 183 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 CELF4Q9BZC1 486 aaKnown RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 RGS18Q9NS28 235 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 TOMM22Q9NS69 142 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 ECHDC1Q9NTX5 307 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 TCP11L1Q9NUJ3 509 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 SPATA6Q9NWH7 488 aaPredicted RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 PKD2L1Q9P0L9 805 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 KIAA1468Q9P260 1216 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 GINS2Q9Y248 185 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 MRPL11Q9Y3B7 192 aaKnown RBP4.79□□□□□ -1.64
CTC1-209ENST00000581729 NUMBLQ9Y6R0 609 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 DOCK8Q8NF50 2099 aa4.79□□□□□ -1.64
CTC1-209ENST00000581729 FRMPD4Q14CM0 1322 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 FSD2A1L4K1 749 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 SRRM3A6NNA2 597 aaPredicted RBP4.78□□□□□ -1.64
CTC1-209ENST00000581729 SOBPA7XYQ1 873 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 MEIS3P2A8K0S8 358 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.78□□□□□ -1.64
CTC1-209ENST00000581729 SPTLC1O15269 473 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 RFPL2O75678 378 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 CXCL14O95715 111 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 SLC3A2P08195 630 aaKnown RBP4.78□□□□□ -1.64
CTC1-209ENST00000581729 TGFB3P10600 412 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 KCNA2P16389 499 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 RFX1P22670 979 aa4.78□□□□□ -1.64
CTC1-209ENST00000581729 TARSP26639 723 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms