RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.48□□□□□ -0.09
SS18-219ENST00000581570 PRC1O43663 620 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 CALM1P0DP23 149 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 CALM2P0DP24 149 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 CALM3P0DP25 149 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 EPCAMP16422 314 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 ATP4AP20648 1035 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 ZNF76P36508 570 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 BCAR1P56945 870 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 TDGQ13569 410 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 MIS18BP1Q6P0N0 1132 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 TMC5Q6UXY8 1006 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 TRMT1LQ7Z2T5 733 aaKnown RBP14.48□□□□□ -0.09
SS18-219ENST00000581570 VPS52Q8N1B4 723 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 HELQQ8TDG4 1101 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 AUTS2Q8WXX7 1259 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 MTA3Q9BTC8 594 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 FBXL21Q9UKT6 434 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 MYO10Q9HD67 2058 aa14.48□□□□□ -0.09
SS18-219ENST00000581570 FAM186AA6NE01 2351 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 RIF1Q5UIP0 2472 aaKnown RBP14.47□□□□□ -0.09
SS18-219ENST00000581570 FOSP01100 380 aaPredicted RBP14.47□□□□□ -0.09
SS18-219ENST00000581570 LMNAP02545 664 aaKnown RBP14.47□□□□□ -0.09
SS18-219ENST00000581570 CLCN3P51790 818 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 NLRP11P59045 1033 aaKnown RBP14.47□□□□□ -0.09
SS18-219ENST00000581570 AAMPQ13685 434 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 GIT2Q14161 759 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 OTOP3Q7RTS5 596 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 CABP7Q86V35 215 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 RAB11FIP4Q86YS3 637 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 SIX5Q8N196 739 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 SLC22A17Q8WUG5 538 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 BBXQ8WY36 941 aaPredicted RBP14.47□□□□□ -0.09
SS18-219ENST00000581570 RMDN1Q96DB5 314 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 MRPL9Q9BYD2 267 aaKnown RBP14.47□□□□□ -0.09
SS18-219ENST00000581570 ANO3Q9BYT9 981 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 ZBP1Q9H171 429 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 SEMA4AQ9H3S1 761 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 RIC8AQ9NPQ8 531 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 DUSP12Q9UNI6 340 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 AKT3Q9Y243 479 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 SPTBN4Q9H254 2564 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 DCHS1Q96JQ0 3298 aa14.47□□□□□ -0.09
SS18-219ENST00000581570 DMDP11532 3685 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 A0A0U1RQF3 1178 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 MED19A0JLT2 244 aaPredicted RBP14.46□□□□□ -0.09
SS18-219ENST00000581570 STK25O00506 426 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 SH2B2O14492 632 aaPredicted RBP14.46□□□□□ -0.09
SS18-219ENST00000581570 MAGEB2O15479 319 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 EIF4BP23588 611 aaKnown RBP14.46□□□□□ -0.09
SS18-219ENST00000581570 TMOD1P28289 359 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 EFCAB12Q6NXP0 572 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 CCDC149Q6ZUS6 474 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 TMTC3Q6ZXV5 915 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 NIPA1Q7RTP0 329 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 DGLUCYQ7Z3D6 616 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 ZNF598Q86UK7 904 aaKnown RBP14.46□□□□□ -0.09
SS18-219ENST00000581570 PLA2G4DQ86XP0 818 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 FANCBQ8NB91 859 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 FEZF2Q8TBJ5 459 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 TMEM87BQ96K49 555 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 MAP7D2Q96T17 732 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 ADAMTS10Q9H324 1103 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 CEP131Q9UPN4 1083 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 MAFBQ9Y5Q3 323 aaPredicted RBP14.46□□□□□ -0.09
SS18-219ENST00000581570 IRAK3Q9Y616 596 aa14.46□□□□□ -0.09
SS18-219ENST00000581570 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 DHX15O43143 795 aaKnown RBP14.45□□□□□ -0.1
SS18-219ENST00000581570 CTSAP10619 480 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 GSPT1P15170 499 aaKnown RBP14.45□□□□□ -0.1
SS18-219ENST00000581570 CHMLP26374 656 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 MCM5P33992 734 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 SREBF1P36956 1147 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 LIFRP42702 1097 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 POLGP54098 1239 aaPredicted RBP14.45□□□□□ -0.1
SS18-219ENST00000581570 NAPAP54920 295 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 WWC2Q6AWC2 1192 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 GPR149Q86SP6 731 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 PPFIBP1Q86W92 1011 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 TEX2Q8IWB9 1127 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 KIAA2013Q8IYS2 634 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 ZNF710Q8N1W2 664 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 MAP4K1Q92918 833 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 ZNF668Q96K58 619 aaPredicted RBP14.45□□□□□ -0.1
SS18-219ENST00000581570 SFXN1Q9H9B4 322 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 KCNK12Q9HB15 430 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 SLC12A7Q9Y666 1083 aa14.45□□□□□ -0.1
SS18-219ENST00000581570 VPS13AQ96RL7 3174 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 ZC3H11AO75152 810 aaKnown RBP eCLIP14.44□□□□□ -0.1
SS18-219ENST00000581570 FGFR4P22455 802 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 ADCY7P51828 1080 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 TTC22Q5TAA0 569 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 DDX53Q86TM3 631 aaKnown RBP14.44□□□□□ -0.1
SS18-219ENST00000581570 TMEM173Q86WV6 379 aaPredicted RBP14.44□□□□□ -0.1
SS18-219ENST00000581570 LRRC71Q8N4P6 559 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 LINC01465Q8N7H1 131 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 IGSF21Q96ID5 467 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 DACT1Q9NYF0 836 aa14.44□□□□□ -0.1
SS18-219ENST00000581570 RBM8AQ9Y5S9 174 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms