RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 CHD1LQ86WJ1 897 aa9.91□□□□□ -0.82
BRIP1-204ENST00000579028 CCDC60Q8IWA6 550 aaPredicted RBP9.91□□□□□ -0.82
BRIP1-204ENST00000579028 SRBD1Q8N5C6 995 aaKnown RBP9.91□□□□□ -0.82
BRIP1-204ENST00000579028 CYP2W1Q8TAV3 490 aa9.91□□□□□ -0.82
BRIP1-204ENST00000579028 ACSF2Q96CM8 615 aaPredicted RBP9.91□□□□□ -0.82
BRIP1-204ENST00000579028 PPP1R16BQ96T49 567 aa9.91□□□□□ -0.82
BRIP1-204ENST00000579028 MYL10Q9BUA6 226 aa9.91□□□□□ -0.82
BRIP1-204ENST00000579028 AGO4Q9HCK5 861 aaKnown RBP9.91□□□□□ -0.82
BRIP1-204ENST00000579028 SPTBN4Q9H254 2564 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 BACH1O14867 736 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 CCNE2O96020 404 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 VTNP04004 478 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 CTSAP10619 480 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 ZSCAN20P17040 1043 aaPredicted RBP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 ATP4AP20648 1035 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 METAP2P50579 478 aaKnown RBP eCLIP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 POLGP54098 1239 aaPredicted RBP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 BCAR1P56945 870 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 CEP55Q53EZ4 464 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 PDXDC2PQ6P474 469 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 CCDC149Q6ZUS6 474 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 GPR149Q86SP6 731 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 TEX2Q8IWB9 1127 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 KIAA2013Q8IYS2 634 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 SIX5Q8N196 739 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 VPS52Q8N1B4 723 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 FEZF2Q8TBJ5 459 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 KCNG4Q8TDN1 519 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 TMEM169Q96HH4 297 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 MRPL9Q9BYD2 267 aaKnown RBP9.9□□□□□ -0.82
BRIP1-204ENST00000579028 SFXN1Q9H9B4 322 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 LY9Q9HBG7 655 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 DLL3Q9NYJ7 618 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 FBXL21Q9UKT6 434 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 TAF6LQ9Y6J9 622 aa9.9□□□□□ -0.82
BRIP1-204ENST00000579028 MYO15AQ9UKN7 3530 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 FANCMQ8IYD8 2048 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 C2orf16Q68DN1 1984 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 A0A0U1RQF3 1178 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 CARNS1A5YM72 827 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 NT5C1B-RDH14C9J2C7 533 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 MEIS1O00470 390 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 CA8P35219 290 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 ALDH7A1P49419 539 aaKnown RBP9.89□□□□□ -0.83
BRIP1-204ENST00000579028 NUCB1Q02818 461 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 PTH1RQ03431 593 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 TMC5Q6UXY8 1006 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 NIPA1Q7RTP0 329 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 DDX53Q86TM3 631 aaKnown RBP9.89□□□□□ -0.83
BRIP1-204ENST00000579028 CABP7Q86V35 215 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 PPFIBP1Q86W92 1011 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 TMEM173Q86WV6 379 aaPredicted RBP9.89□□□□□ -0.83
BRIP1-204ENST00000579028 ZNF710Q8N1W2 664 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 AUTS2Q8WXX7 1259 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 BBXQ8WY36 941 aaPredicted RBP9.89□□□□□ -0.83
BRIP1-204ENST00000579028 RSPH1Q8WYR4 309 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 MTA3Q9BTC8 594 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 ADAMTS10Q9H324 1103 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 KCNK12Q9HB15 430 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 ZNF302Q9NR11 478 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 IGSF9Q9P2J2 1179 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 WNT16Q9UBV4 365 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 R4GN57 208 aa9.89□□□□□ -0.83
BRIP1-204ENST00000579028 KRBA1A5PL33 1030 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 DDX39AO00148 427 aaKnown RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 MAGEB2O15479 319 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 DHX15O43143 795 aaKnown RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 KRT37O76014 449 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 FOSP01100 380 aaPredicted RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 EIF4BP23588 611 aaKnown RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 NLRP11P59045 1033 aaKnown RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 B4GALNT3Q6L9W6 998 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 SWSAP1Q6NVH7 229 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 MIS18BP1Q6P0N0 1132 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 C15orf39Q6ZRI6 1047 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 CMTR1Q8N1G2 835 aaKnown RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 METTL13Q8N6R0 699 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 LINC01465Q8N7H1 131 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 TMEM87AQ8NBN3 555 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 RNF169Q8NCN4 708 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 ANO3Q9BYT9 981 aa9.88□□□□□ -0.83
BRIP1-204ENST00000579028 MAFBQ9Y5Q3 323 aaPredicted RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 MYH9P35579 1960 aaKnown RBP9.88□□□□□ -0.83
BRIP1-204ENST00000579028 hCG_1642624A0A1W2PR95 340 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 NARSO43776 548 aaKnown RBP9.87□□□□□ -0.83
BRIP1-204ENST00000579028 CALM1P0DP23 149 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 CALM2P0DP24 149 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 CALM3P0DP25 149 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 SREBF1P36956 1147 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 CLCN3P51790 818 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 TBC1D8BQ0IIM8 1120 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 PTPN14Q15678 1187 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 LETM2Q2VYF4 491 aa9.87□□□□□ -0.83
BRIP1-204ENST00000579028 DIEXFQ68CQ4 756 aaKnown RBP9.87□□□□□ -0.83
BRIP1-204ENST00000579028 ZC3H14Q6PJT7 736 aaKnown RBP9.87□□□□□ -0.83
BRIP1-204ENST00000579028 HEATR3Q7Z4Q2 680 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms